Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Psa7g1109 | ATGTATGCTTCAACTTCCCTCACTTCACAGTATGAGCTTCTTGTGAAATCCAACACTAGAAGGTTACTCTTCCAAGGCCCAATTGATAATCAACCACTAAACAACCACACTTCAACCGACTCCTCGTATTTTGGAGTTCGTGAATTTGATTCTAACGTTGTGATGATACTTGCAGTGTTATTGTGTGCTCTTATTACCTCACTTGCATTAAACTCCATCATAAGATGTGCCTTAAAACTTTCTAACGAAGCCATCAACAACAACCAAGCTTCACAACAGTTGGCTAATAAAGGAATCAAGAAGAAAGCTCTCAAAAAGTTCCCCACATTGAACTATTCAACCGAGATGAAACTACCTGGTTTGGACACAGAGTGTGTCATATGTCTCTCCGAGTTTGCCAAGGGTGAAAAGCTACGGATTTTGCCTAAATGCAACCATGGTTTTCATGTTCGTTGCATTGACAAATGGCTAAAGGAACATTCATCTTGTCCCAAGTGCAGACACTGTCTTCTTCAAACATGTCCAAAGGTTGGTGAGTCACAGGTGCAACCAATTGTGCTGCCAGTGCCGGAAATCACTGTACGGATTCAACCACTAGACCATGAAGCTGTTGAACGTAACTATAGGGAAGAAAGAAGATAA | 642 | 0.4128 | MYASTSLTSQYELLVKSNTRRLLFQGPIDNQPLNNHTSTDSSYFGVREFDSNVVMILAVLLCALITSLALNSIIRCALKLSNEAINNNQASQQLANKGIKKKALKKFPTLNYSTEMKLPGLDTECVICLSEFAKGEKLRILPKCNHGFHVRCIDKWLKEHSSCPKCRHCLLQTCPKVGESQVQPIVLPVPEITVRIQPLDHEAVERNYREERR* | 214 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Psa7g1109 | 213 | Pfam | Ring finger domain | 124 | 167 | IPR001841 | - | |
Psa7g1109 | 213 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 84 | 171 | IPR013083 | - | |
Psa7g1109 | 213 | ProSiteProfiles | Zinc finger RING-type profile. | 125 | 167 | IPR001841 | - | |
Psa7g1109 | 213 | SUPERFAMILY | RING/U-box | 103 | 173 | - | - | |
Psa7g1109 | 213 | CDD | RING-H2_PA-TM-RING | 124 | 167 | - | - | |
Psa7g1109 | 213 | PANTHER | RING-H2 FINGER PROTEIN ATL78 | 1 | 211 | IPR044602 | GO:0016567|GO:0016740 | |
Psa7g1109 | 213 | PANTHER | TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED | 1 | 211 | - | - | |
Psa7g1109 | 213 | SMART | ring_2 | 125 | 166 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Psa7g1109 | Psa-Chr7 | 82899133 | 82900377 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Psa7g1109 | 21 | 171 | C3H Transcription Factor Family | AT3G10910 | 45.783 | 9.50e-41 | 135 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Psa7g1109 | K19040 | - | gmx:100780127 | 277.33 |