Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1101 ATGAGTCTGGCGGGGACGGAAAGCTCGGAAGAGGGTGCAGTGCATCCGGAGCCACCTGATCCTGATGTTCTTGAGATTGATCCTACTTGTCGTTACATCAAGTATAAAGAAGTGATAGGCAAAGGAGCCTTCAAAACTGTTTACAGAGCATTTGATGAGGTCAATGGGATTGAAGTTGCATGGGGCCAGGTTCAGATTGACGAGGTGTTGCAGTCACCGGGTGACTTAGATAGGCTATACTCAGAAGTGCATCTCTTAAAATCGCTACGGCACAGTAACATAGTAAGGTTCTACAATTCTTGGATTGATGACAAGCGCAAGACTGTTAATATGATTACTGAGCTGTTTACGTCGGGTAGCCTTAAACAGTATCGTAAAAAACACAAGAAGGTTGACTTGAAGGCTGTCAAAGGATGGGCACGACAGATTCTGATGGGTTTAAACTACCTCCACAGTCACAATCCACCAATTATACACAGGGACTTGAAATGTGATAATATATTTATCAATGGTCACCAAGGAGAAGTTAAAATTGGTGATTTGGGGCTGGCGACTCTCTTGACTCGGGCTAATGCTAAGAGTGTTATCGGAACTCCGGAGTTTATGGCACCTGAAATGTATGATGAAAATTACAACGAATTAGCTGACATATACTCATTTGGTATGTGCATGCTTGAGTTGGTGACTTCTGAGTATCCTTACAGTGAATGCAGAAACTCAGCGCAGATATACAAGAAAGTTTCATCTGGTATAAAGCCTGTTGCTCTTTCTAGAGTGATAGATCCCGAGATAAAATCATTTATTGAAAAATGTCTTGTTCCAGCCTCCCAAAGATTGTCAGCAAAGGAGCTTCTGATGGACCCCTTTGTTCAAGTGAATGGTTCAGCAAAGAACATTTCTTTCCCACTGCCTGATATTGTCCTTCCCAAACTGGGAGCTTCTGAAAACAGAGGTATGATGTCAGAAGGTCCTGCTAGTACACGTATTAGGGCTATTTCTATGGATCTTGGTGACCCTAACGAGCTACCTGTGATCACTGTACTTGATAATTCAACTGTCGGTGCATCATCTTCTCCAAGTGTTGAGATAAGAAGGTTGAAGGGTGGTGATACCTTCTTTCTGAAAGGTGACCAAAATGATGAGAGTTCTGTATCATTAGTTCTTCGGATAGCTGATCAGAAAGGACAAGCAAGAAATATCCATTTCATCTTCTACCTTGACAGTGATACTGCTGTCTCGGTTTCAAAGGAAATGGTTGAGCAACTTGAACTTGCTGATCAGAACGTAAAATTTATAGCTGAGTTAATCGATTTGTTATTGATGAGATTGGTTCCTGAATGGAAACCTTGTGTAGCAATCGATCATTTGGCCTCTGTAAATGGTAAATGGACTAATGCTAGCCAACAGAGAGACACAGAGTTGGCTAAATACAAAGGAATCTCTAAACATTCCACTGAAGATGCAGGTCCCTCAACCTCATACGGAAAATCAGCTGCAAAAGAGAACGTCGACAATATGGATATATGTTCTGAGATGTCATATGCTTCTGCAACATCAGACATCAATGATAAGTTTTCTATGGTTTCATTCATGTCGGCTGAATCAGGATTTGATGGAGGGAGTCAGAGCTCATTTGCATCTGAAGCTGGGACATCATCTGATTACAGGAGCAAGACTTTAGACATGGGAAGCAACAGTATGATGAGCTTCTCAAGTTATCCCCTCAGTGTTTCTTCCTTGTCCGAACTTGATGATGAGTTGAGAGTAGAGTTAGAAATGATCGAACAGCAATATCAGGAGGCAATTAAAGATTTATCGAAAAGAAGAAACTTGGCCATCGAGGAGATTAAAAGGAGAATGGCAGAGAAGACGGTATCATAG 1881 0.4163 MSLAGTESSEEGAVHPEPPDPDVLEIDPTCRYIKYKEVIGKGAFKTVYRAFDEVNGIEVAWGQVQIDEVLQSPGDLDRLYSEVHLLKSLRHSNIVRFYNSWIDDKRKTVNMITELFTSGSLKQYRKKHKKVDLKAVKGWARQILMGLNYLHSHNPPIIHRDLKCDNIFINGHQGEVKIGDLGLATLLTRANAKSVIGTPEFMAPEMYDENYNELADIYSFGMCMLELVTSEYPYSECRNSAQIYKKVSSGIKPVALSRVIDPEIKSFIEKCLVPASQRLSAKELLMDPFVQVNGSAKNISFPLPDIVLPKLGASENRGMMSEGPASTRIRAISMDLGDPNELPVITVLDNSTVGASSSPSVEIRRLKGGDTFFLKGDQNDESSVSLVLRIADQKGQARNIHFIFYLDSDTAVSVSKEMVEQLELADQNVKFIAELIDLLLMRLVPEWKPCVAIDHLASVNGKWTNASQQRDTELAKYKGISKHSTEDAGPSTSYGKSAAKENVDNMDICSEMSYASATSDINDKFSMVSFMSAESGFDGGSQSSFASEAGTSSDYRSKTLDMGSNSMMSFSSYPLSVSSLSELDDELRVELEMIEQQYQEAIKDLSKRRNLAIEEIKRRMAEKTVS* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1101 626 Gene3D - 382 477 - -
Psa7g1101 626 SMART serkin_6 33 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g1101 626 ProSiteProfiles Protein kinase domain profile. 33 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g1101 626 Pfam Protein kinase domain 35 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g1101 626 Gene3D Phosphorylase Kinase; domain 1 19 114 - -
Psa7g1101 626 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK6-RELATED 4 499 - -
Psa7g1101 626 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK6-RELATED 501 625 - -
Psa7g1101 626 Gene3D Transferase(Phosphotransferase) domain 1 116 297 - -
Psa7g1101 626 CDD STKc_WNK 31 289 - -
Psa7g1101 626 Coils Coil 584 626 - -
Psa7g1101 626 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 384 437 IPR024678 GO:0004674|GO:0005524
Psa7g1101 626 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
Psa7g1101 626 MobiDBLite consensus disorder prediction 1 21 - -
Psa7g1101 626 SUPERFAMILY Protein kinase-like (PK-like) 35 291 IPR011009 -
Psa7g1101 626 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 501 625 - -
Psa7g1101 626 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 4 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1101 Psa-Chr7 82339051 82342713 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1101 22 623 MAP Kinase Kinase Kinase AT5G41990 46.535 5.51e-173 502
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Psa7g1101 Pkinase 3.8e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1101 K08867 - gmx:121175054 848.966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g1101 7 82339051 82342713 Psa5g1471 5 113509842 113512509 PCT