Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1100 ATGGAATTTTTGGACGAAGATGCGAAACCGAAGTTCCTGTTTCAGTCCGGTGCACCCGCGCCCACTGTATCACAGCCTTCCGAGAAACCAACGAAACCGTTCATCGCTGTAACCGTTGCTCTCTCTTCAATCTTCTTCGCTCTCGCTATCTTCGTCTTCCCATCGGAACCTTACAGATCGATTCTCTTCTGGTTCGCACTATCACTTCTCCTTGGTCCTTTCGCTCCTAGCTCAATCACTGGCGGTGATTTCCGCGTCGGCCGTGGTCATGTCGTTAACTTCCCCGATCAGGAAGCCTCAGCTGATGATGATGACGTCAGGAAAAGATCTCAGCAGCGCAGATCTAAGCCGCGGAGATCGGAGGATGTTGCGTCCGTAGTTCTTCCGGCGCCGGTAGTTTCAAACGGCAGTGCTTTGAAGAATCGAAATGGAAACGGTGCTTCATTGACGGCGGCGGTGGTGGAGGAGGAGAAGGAATGGAACGAGGACGACATTGAGATTCTGAAGAAGCAAATTGTGAAACATCCGGTGGGGAAACCAGGACGATGGGAGGTGATAGCGGAGGCATTCGGAGGGCGGCACAAAGCAGAGAGCGTGGTGAAGAAGGTGAAGGAGTTAGGGGAGAAGAAGGTTGATGATTCGGATTCGTATGAGCAGTTTCTGAAGAAGAGAAAAGCGTTGGATAAGAGACTTGTTGAAGAAGGAGGAGAATTAGCAACGGTTGAGAAAGTTGAGAGTGTTTGGAGTTCAAATGAGGACATTGCTTTGTTGAATGCTCTGAAAGCATTTCCGAAAGATGTTGCAATGAGATGGGAGAAAGTTGCTGCTGCTGTTCCCGGAAAATCGAAAGCTGCTTGTATGAAAAGAATGGCTGAATTGAAGAAAGGGTTTCGGAATGCAAAATCTGGATCCGAAGTTTAG 921 0.4908 MEFLDEDAKPKFLFQSGAPAPTVSQPSEKPTKPFIAVTVALSSIFFALAIFVFPSEPYRSILFWFALSLLLGPFAPSSITGGDFRVGRGHVVNFPDQEASADDDDVRKRSQQRRSKPRRSEDVASVVLPAPVVSNGSALKNRNGNGASLTAAVVEEEKEWNEDDIEILKKQIVKHPVGKPGRWEVIAEAFGGRHKAESVVKKVKELGEKKVDDSDSYEQFLKKRKALDKRLVEEGGELATVEKVESVWSSNEDIALLNALKAFPKDVAMRWEKVAAAVPGKSKAACMKRMAELKKGFRNAKSGSEV* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1100 306 Gene3D - 154 212 - -
Psa7g1100 306 SUPERFAMILY Homeodomain-like 244 292 IPR009057 -
Psa7g1100 306 CDD SANT 248 294 IPR001005 -
Psa7g1100 306 MobiDBLite consensus disorder prediction 100 121 - -
Psa7g1100 306 ProSiteProfiles Myb-like domain profile. 240 294 IPR001005 -
Psa7g1100 306 CDD SANT 159 206 IPR001005 -
Psa7g1100 306 MobiDBLite consensus disorder prediction 95 123 - -
Psa7g1100 306 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 1 305 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
Psa7g1100 306 SMART sant 244 296 IPR001005 -
Psa7g1100 306 SMART sant 156 209 IPR001005 -
Psa7g1100 306 Gene3D - 240 305 - -
Psa7g1100 306 SUPERFAMILY Homeodomain-like 157 196 IPR009057 -
Psa7g1100 306 PANTHER TRANSCRIPTION FACTOR MAMYB 1 305 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Psa7g1100 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1100 - - gmx:100780658 360.147