Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1099 ATGAATGTGATGGATTATGATCAATTTCATGAGTGTGACTTAGAAATTGCTTTTCCATTTTTTCAAACAGAAAATATATTATCTCCAAATACAATCCTAAATGAAATATTATTTGATCAACAAGATCAATCACAATATCTCTTATCTCCAAATACCATCATAGATGAGATCTTTGATGAAGAAAAGTCCATAGAAAGATCGATGATGCAGCATACAAATCAGGACGAGACAATGCCTCTAGAGAATGAATTGTGTCGAGGAACTCCTGAAAAAGGCTGCGAAAACGTGCTTGGTTCGAGAGAGGAGGATTCGTTTTGGAAGGAAGTTCAAGATGAGTTAATGGAAGAGACAAGTCTAGTTGATCTTTTGCTGATAGGAGCTGAAGCTGTTGAATCACAGAACATGACACTTGCTTCTGACATAATTGAAAAACTAAACAATGCAGCGTTTTTAGAAAACGGCGATAGTTTATTGAACAGGTTGTGTCCTTTCTTTACACAAGGTTTGTTTTACAAAACTACGAATGCTCCTAAATTCCACTGTGAACATGTTTCTACACAGACAAACACATTCTGTGTGTTTCAGATACTTCAAGAACTCTCTCCGTACGTAAAATTTGCTCATTTCACAGCAAACCAAGCAATTTTCGAAGCTACGGACGGTGTTGAACATGTTCATGTCATTGATTTCGATATCATGGAGGGAATTCAATGGCCATCATTGATGGTTGACTTTGCAATGAGAAAGAACACTACTTCACTTAGAGTAACAGCAATCACAGTAGATCAGCAAACTGCAGCCTCGGTTCAACAAACGGGAAGAAGGCTAAAAGAGTTCGCAGACTCGATCAATTTCCCGTTTGTGTTCGATACGATGATGATGGAGAGTGAAGAAGATTTTCAAAGAATCGAACACGGTGACACACTTATTGTCAACTGTATGATACATCAGTGGATGCCAAACAGAAGTTTCTCATCAGTCAAAACTTTTCTCGATGGCGTAAGAAAACTATCACCAAAGCTTATTGTGTTAGTTGAAGAAGAACTGTTTAATTTTTCTAGACTCAAATCCATGTCCTTTGTGGAGTTTTTCTGTGAGGCTTTGCATCACTATATTGCAGTTTGTGATTCATTAGTTACTACTTTGTGGGGTAGCCATAAGATGGAGTTAAGCCTTATAGAGAAAGATGTCTTGGGAGTTAGAATCTTGGACAGTGTAAGACAGTTCCCTTGTGAAAGAGAAGAGAGAATGTTGTGGGAAGAAAAGTTTTTTTATTCTTTGAAAGGGTATAAAAGTGTTGGTATGAGTACATATAATATTTCACAGGCTAAGTTCTTGGTAAGCTTGTTTGGTAAAGGGTATTGGGTGCAATTTGAGAATTTTAGGTTGGCTTTAAGTTGGAAGTCAAGACCTTTGACTTCAGTTTCAATCTGGGAACCAATAGATTATATGAGTGACAAGGTCAAATAG 1470 0.3714 MNVMDYDQFHECDLEIAFPFFQTENILSPNTILNEILFDQQDQSQYLLSPNTIIDEIFDEEKSIERSMMQHTNQDETMPLENELCRGTPEKGCENVLGSREEDSFWKEVQDELMEETSLVDLLLIGAEAVESQNMTLASDIIEKLNNAAFLENGDSLLNRLCPFFTQGLFYKTTNAPKFHCEHVSTQTNTFCVFQILQELSPYVKFAHFTANQAIFEATDGVEHVHVIDFDIMEGIQWPSLMVDFAMRKNTTSLRVTAITVDQQTAASVQQTGRRLKEFADSINFPFVFDTMMMESEEDFQRIEHGDTLIVNCMIHQWMPNRSFSSVKTFLDGVRKLSPKLIVLVEEELFNFSRLKSMSFVEFFCEALHHYIAVCDSLVTTLWGSHKMELSLIEKDVLGVRILDSVRQFPCEREERMLWEEKFFYSLKGYKSVGMSTYNISQAKFLVSLFGKGYWVQFENFRLALSWKSRPLTSVSIWEPIDYMSDKVK* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1099 489 Pfam GRAS domain family 119 479 IPR005202 -
Psa7g1099 489 PANTHER OS12G0162700 PROTEIN 1 479 - -
Psa7g1099 489 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 479 IPR005202 -
Psa7g1099 489 ProSiteProfiles GRAS family profile. 110 479 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1099 Psa-Chr7 82328462 82329931 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1099 119 482 GRAS Transcription Factor Family AT5G41920 32.984 2.03e-45 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Psa7g1099 GRAS 3.3e-76 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1099 - - gmx:100804613 657.521