Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1090 ATGTCTTCTCTATTCTCTTTCTCTCTTTTTCTTTTTATCACATTCACCTCCGCCGCTCGCCACCACCACCATCACTCGCCCACTCCCACTACCGCGCCTTCTCTCTCTCCCTCCGCCGTGCCGGATATCCAACAAGCCTGCAAAGCTACTCGCTTCTCTCAACAATGCGAGTCCTCTCTCTCAAAACTCCCTCCAAATTCCACAACTCTCCAACTCCTCCTATTTTCCATCGCGCAATCCTCAGAAAATCTCGTAACCGCCAAATCCATGGTTAAATCCATTCTAGACTCTTCCAAAGACAGCCGCAACCGCACCGTCGCGGCAACCACCTGCATTGAGACTCTCACGAACTCTCAACACCGAATTTCCCTCTCCAACGACGCGCTCCCACGTGGAAAAATCAAAGACGCAAGGGCGTGGCTCGGCGCTGCGCTCGCTTATCAATACGACTGCTGGAGCGGACTCAAATACGCCAACGACACCCGCGCCGTCGGCGAAGCGATGTCGTTTATCGATTCCCTGACGATGCTCTCCAGTAATGCTCTTGCCATGGCGTTTTCCTACGATGTTTATGGAACCGACACTTCGTCGTGGAAGTCTCCAACCACCGAACGCGACGGTTTCTGGCAAGCGGCTCAATCAGACGGAGGATCAAGATCTAACATAGGGATTCCACCGGAATTGAAGCCGGATGTTACGGTGTGCAAAGGAGGGGAGGATGGATGTTACAAGACGGTGCAAGAAGCGGTTAACGCAGCGCCGAGTATCGCCGTTGACGGGAAGAGGTTTGTGATATTTATAAAAGAAGGGGTTTATGAAGAAACCGTTAGGGTTCCGTTAGAGAAGACGAATTTGGTGTTCTTGGGCGACGGCATTGGGAAGACTGTCATCACCGGGTCGGCTAACGCCGGCCAGCCCGGAATGACTACATACAATTCAGCCACAGTCGCGGTTCTTGGCGATGGATTCATGGCAAAGGATTTAACATTTCAAAACACAGCAGGTCCTGATGCACATCAAGCCGTGGCATTAAGATTAGACAGTGATCTTTCTGTAATTGAGAATTGCGAGTTCATAGGAAATCAAGACACTCTTTATGCTCATTCACTGCGCCAATTCTACAAATCATGTCGCATTATAGGGAACGTGGATTTCATCTTTGGAAATTCAGCTGCAATCTTCCAAGACTGTCAGATTCTGGTTCGTCCTAGACAAGTCAAGCCAGAGAAAGGCGAGAACAATGCAATCACAGCTCATGGTAGAACCGACCCTTCACAAACTACAGGGTTTGTTTTTCAGAACTGTTTGATTAATGGAACGGAGGATTACATGGCATTGTATCATAGTAATCCTAAAGTGCATAAGAACTATTTGGGTAGGCCATGGAAGGAGTATTCTAGAACAGTTTTTATCAACTCAGTTTTGGAAGAACTTGTTACTCCCGGGGGTTGGATGCCATGGAGTGGTGACTTTGCACTTAAGACTCTTTATTATGGAGAATTTGAGAACAAGGGAGGTGGTTCTGATTTGTCTCAAAGGGTGTCTTGGAGTAGTAAAATCCCTGCTGAGCATGTGTCGAGTTATTCAGTTGAGAATTTCATTCAAGGTAGTGAATGGATTATATCATCTCAGTAA 1635 0.4771 MSSLFSFSLFLFITFTSAARHHHHHSPTPTTAPSLSPSAVPDIQQACKATRFSQQCESSLSKLPPNSTTLQLLLFSIAQSSENLVTAKSMVKSILDSSKDSRNRTVAATTCIETLTNSQHRISLSNDALPRGKIKDARAWLGAALAYQYDCWSGLKYANDTRAVGEAMSFIDSLTMLSSNALAMAFSYDVYGTDTSSWKSPTTERDGFWQAAQSDGGSRSNIGIPPELKPDVTVCKGGEDGCYKTVQEAVNAAPSIAVDGKRFVIFIKEGVYEETVRVPLEKTNLVFLGDGIGKTVITGSANAGQPGMTTYNSATVAVLGDGFMAKDLTFQNTAGPDAHQAVALRLDSDLSVIENCEFIGNQDTLYAHSLRQFYKSCRIIGNVDFIFGNSAAIFQDCQILVRPRQVKPEKGENNAITAHGRTDPSQTTGFVFQNCLINGTEDYMALYHSNPKVHKNYLGRPWKEYSRTVFINSVLEELVTPGGWMPWSGDFALKTLYYGEFENKGGGSDLSQRVSWSSKIPAEHVSSYSVENFIQGSEWIISSQ* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1090 544 Gene3D - 226 544 IPR012334 -
Psa7g1090 544 Gene3D Invertase/pectin methylesterase inhibitor family protein 41 187 IPR035513 -
Psa7g1090 544 TIGRFAM PME_inhib: pectinesterase inhibitor domain 6 184 IPR006501 GO:0004857
Psa7g1090 544 Pfam Pectinesterase 231 536 IPR000070 GO:0030599|GO:0042545
Psa7g1090 544 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 21 542 - -
Psa7g1090 544 CDD PMEI-like_3 46 184 - -
Psa7g1090 544 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 42 184 IPR035513 -
Psa7g1090 544 PANTHER PECTINESTERASE 21 542 - -
Psa7g1090 544 SUPERFAMILY Pectin lyase-like 229 540 IPR011050 -
Psa7g1090 544 SMART PMEI_2 38 184 IPR006501 GO:0004857
Psa7g1090 544 Pfam Plant invertase/pectin methylesterase inhibitor 43 184 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1090 Psa-Chr7 81358013 81360903 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1090 36 539 Carbohydrate Esterase AT5G09760 65.753 0.0 692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1090 - - adu:107480269 840.491