Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1064 ATGCCGGCGTGGTGGAGTAGAAGGTCATCAAAGAACAAACAAGAGCGCGATGGTAACGATAATGATGAAGAAGATGAAGAAGAACAATCACGCGGCGGCGTTCTTCACTTTAATTTCATGAAATCGCCTATCAACGCGATTAGGAACGGTAGCAACGGTGATAGTAAGAAGAGTAAGATGAAGAAACAGAAGCCCAAGAGTTTTGATGAGGTTTTCAACCGGAATTCACCGAGAACTAGCAGGGAATTTGATGGCGGCGCCGCCACTGAAAAGAAAGGACTTCCGTTGCCTCTTCCTGCTCACTGTGATCAGGCTTTGGGATCTCCTTCCGTTTCTGGCTCTAGTGTCAGTTCATCTACCTCTTTTGATGATCATCCAATTTCTCCTCAGTTTGTTTCTAATAACAGAGGACAAGATGAGGTGAAGTTCAATGTGAGGTCAAGAAGTCCAGGTCCTGCGTCAAGAGGACCTACTAGCCCTACATCACCTCTTCATCCAAGGTTGCAGGCTTTGAGTCTAGACTCACCTACTGGAAAGCAGGACGATGGAAGGAGTCAATGTCATCCATTGCCTCTTCCGCCAGGTTCTCCTACTAGTCCTTCTTCTGCTCTTTGCAACACACGTTCAAGTGGACCGTTTGAAAACACTACCCCTAACCTGTCCAAGTGGAAGAAAGGAAAGCTTCTAGGCCGGGGAACATTTGGGCATGTTTATCTTGGATTCAATAGTGAAAATGGGCAAATGTGTGCAATAAAAGAAGTTAGGGTTGGCTGTGATGATCAAAATTCAAAAGAGTGCCTCAAACAACTTAACCAGGAGATAAATTTGCTCAATAAGCTTTCACACCCAAACATTGTTCAATACCATGGGAGTGAACCGGGAGAGGAATCACTTTCGATTTATTTGGAATATGTCTCTGGTGGTTCTATCCATAAGTTACTTCAGGAATATGGACCGTTCAAGGAGCCTGTTATTCAAAATTATACCAGGCAGATTGTCTCTGGGCTTGCCTATCTACATGGAAGAAATACAGTACACAGGGATATCAAAGGGGCTAACATACTAGTTGATCCTAATGGTGAAATCAAACTAGCAGACTTTGGAATGGCTAAACATATAACTTCTGCCGCCTCAATGCTTTCATTCAAAGGAAGTCCGTACTGGATGGCACCTGAAGTTGTAATGAACACAAATGGCTATAGCCTTCCAGTTGATATATGGAGCTTGGGATGCACACTTATTGAAATGGCAGCGTCGAAGCCTCCGTGGAGTCAGTATGAAGGGGTAGCTGCCATATTTAAAATTGGAAACAGCAAAGATATGCCTGAAATTCCCGAGCATCTGTCAAATGATGCGAAGAATTTCATTATGTTATGTTTACAGCGGGACCCATTAGCTCGCCCAACAGCCCAGAAATTACTAGAGCACCCCTTCATTAGAGATCAATCAGCAACAAGAGCTGCAACCAGAGATGTTTCCTCTTACATGTTTGATGGAAGCCGAACACCGCCTGTTTTAGAGCCTCATTCCAATAGAAGAAGTATAACATCACTTGATGGAGACTATGCAACGAAGTCAGCTATTGCAGCTCCACGTGCAACAAGGAGTCCAAGAGATCACACAAGAATGATCACATCTTTACCAGTATCTCCCTCTTCAAGTCCATTGCGACAGTATGGAGCAGATCATAGGAGCTGTTTCTATTCTCCTCCTCATCCATCTTACACAACAATGGGACAAAATAGTTACACTTTGAATGACACACCCTCTTATCCAGTGAGATCAAATGCAACATTTACTCTTGACCCTTGGCGGCATGAAACATCTAGATACAAAGCCCATACACCACCTGGTGGATCTCCAAGAATGAGGTTCATTTGA 1881 0.4386 MPAWWSRRSSKNKQERDGNDNDEEDEEEQSRGGVLHFNFMKSPINAIRNGSNGDSKKSKMKKQKPKSFDEVFNRNSPRTSREFDGGAATEKKGLPLPLPAHCDQALGSPSVSGSSVSSSTSFDDHPISPQFVSNNRGQDEVKFNVRSRSPGPASRGPTSPTSPLHPRLQALSLDSPTGKQDDGRSQCHPLPLPPGSPTSPSSALCNTRSSGPFENTTPNLSKWKKGKLLGRGTFGHVYLGFNSENGQMCAIKEVRVGCDDQNSKECLKQLNQEINLLNKLSHPNIVQYHGSEPGEESLSIYLEYVSGGSIHKLLQEYGPFKEPVIQNYTRQIVSGLAYLHGRNTVHRDIKGANILVDPNGEIKLADFGMAKHITSAASMLSFKGSPYWMAPEVVMNTNGYSLPVDIWSLGCTLIEMAASKPPWSQYEGVAAIFKIGNSKDMPEIPEHLSNDAKNFIMLCLQRDPLARPTAQKLLEHPFIRDQSATRAATRDVSSYMFDGSRTPPVLEPHSNRRSITSLDGDYATKSAIAAPRATRSPRDHTRMITSLPVSPSSSPLRQYGADHRSCFYSPPHPSYTTMGQNSYTLNDTPSYPVRSNATFTLDPWRHETSRYKAHTPPGGSPRMRFI* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1064 626 MobiDBLite consensus disorder prediction 107 140 - -
Psa7g1064 626 MobiDBLite consensus disorder prediction 199 218 - -
Psa7g1064 626 SUPERFAMILY Protein kinase-like (PK-like) 221 558 IPR011009 -
Psa7g1064 626 CDD STKc_MEKK1_plant 222 479 - -
Psa7g1064 626 MobiDBLite consensus disorder prediction 1 140 - -
Psa7g1064 626 Pfam Protein kinase domain 224 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g1064 626 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 606 - -
Psa7g1064 626 SMART serkin_6 223 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g1064 626 Gene3D Transferase(Phosphotransferase) domain 1 220 502 - -
Psa7g1064 626 MobiDBLite consensus disorder prediction 54 77 - -
Psa7g1064 626 ProSiteProfiles Protein kinase domain profile. 223 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g1064 626 MobiDBLite consensus disorder prediction 193 218 - -
Psa7g1064 626 PANTHER MAP KINASE KINASE KINASE 1 606 - -
Psa7g1064 626 MobiDBLite consensus disorder prediction 151 166 - -
Psa7g1064 626 ProSitePatterns Protein kinases ATP-binding region signature. 229 252 IPR017441 GO:0005524
Psa7g1064 626 MobiDBLite consensus disorder prediction 147 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1064 Psa-Chr7 78752893 78757886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1064 1 538 MAP Kinase Kinase Kinase AT1G53570 54.720 0.0 530
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Psa7g1064 Pkinase 1.1e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1064 K04421 - gmx:100787064 900.197