Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1034 ATGAAGATGCAAGGTTGTGAGGTTGAAGCCATTGGCATAAACTACAAGATCCACACAAACAGAACAGAACACCCTTTTAAAATCTTCAGCAAATCACCACAACTAGATAATACTAATGGTCAAGAAACAGAGGATGAGGAAGAAGGAAGAGGAGATGAAAAAAGTTGCACTGAAGTGAGGCATGTACTCAAGAATGTGAGTTTTCAAGCAAAACCATGGGAAATTCTAGCAATTGTTGGACCAAGTGGAGCTGGAAAATCATCACTACTTGAGATCTTAGCAGGTAAACACACTCCACAAAAAGGGTCAGTGTTGTTGAACCAAAAACCTGTTGACAAATCTCAGTTCAGAAAGCTATCAGGTTATGTTACTCAAAAGGATACTTTGTTTCCTTTACTTACAGTTGAAGAAACCATGATGTTCAGTGCAAGGCTAAGGCTAAAACTTCCTCAACAACAACTATGTTCAAGGGTCAAGTCACTGATTCAAGAGCTTGGACTTGATCATGTTGCCGGGACTAGAATCGGCGACGATCGAGTCCGAGGTATATCAGGCGGGGAAAGGCGCAGAGTTTCTATTGGTGTTGAAATCGTACATGATCCAAAAGTTTTGATTCTTGATGAACCAACTTCTGGGCTTGACAGTACTTCAGCTTTGCAAATTATTGATATGCTCAAGGTTATGGCTGAAACTAGGGGAAGAACTATAATACTAAGTATTCATCAACCTGGTTTCAGAATTGTGAAGCTGTTCAATTCATTGTTGTTGTTGGCTAATGGTTCTGTGTTACATCATGGAAGTGCTGATTTAATGAGTTTGAATTTGAGATTAATGGGTCTAGAGCTTCCTCTTCATGTTAATGTAGTTGAATTTGCTATTGATTCCATTGATACCATCCAGCGACAACAACAATGTCAGGTGGAAACCGAAACGCCGAGGCTATTGCAAGGGACAATGCAACAGAAGAAAGGTGCTGATAATGAACAACAACCAGGTGAGAGTAAAATTGGTAAGTTCACTTTGCAGCAGCTATTTCAACAATCTAAAGTAATTGATGAAGATATCATCAATAATAAAGGAACTGGAATGGATTTCTCTTATGATTTTGCTAATTCTAGATTGAGAGAAACCATGATTCTAACTCATAGATTCTCCAAAAATATATTCCGTACAAGAGAGCTATTTGCATGTAGGACAATTCAGATGCTGATTTCAGGACTAGTTTTAGGATCAATCTTTTGTAACCTCAAAGATGATCTAAAAGGAACAGAAGAAAAGGTTGGTCTATTTGCTTTTATATTAACCTTTCTGTTATCAAGCAGCATCGAAGCTCTACCAATTTTTCTACAAGAAAGGGAAATTCTCATGAAAGAAACATCTTGCGGAAGCTACCGTGTGTCGTCTTATGCTATTGCAAATGGACTAGTTTACTTGCCATTTCTTCTAATCCTAGCCATTTTGTTCACAGTTCCTTTATACTGGCTTGTTGGTCTCAACACAGACTTCACTGCTTTTCTGCACTTTCTGTTACTGATATGGCTTGTTCTTTACACGGCTAATTCAGTTGTGGTGTGTTTCAGTGCTCTTGTGCCTAATTTCATTGTTGGTAATTCAGTGATTAATGGTGTTATAGGTTCTTTCTTCTTGTTCTCTGGTTATTTCATATCAAACCATGAGATTCCTAATTACTGGATTTTCATGCATTATATATCACTTTTTAAGTATCCCTTTGAAGGGTTTCTGATCAATGAGTTCTCAAACTCAAAAAAGTGTTTGGAGTACATGTTTGGTGCATGTGTGATGAAGGGAGAGGATGTGCTTAAAGAAGAAGGGTATGGAGGAGAAGGTAGCAGATGGAAGAATGTTGGTGTCACTGTTGGCTTCATCATGGTTTACAGATTCATTTCCTATGTTATTCTGAGATACAAATGCTCAGAGAGGAGGGTCTAG 1950 0.3821 MKMQGCEVEAIGINYKIHTNRTEHPFKIFSKSPQLDNTNGQETEDEEEGRGDEKSCTEVRHVLKNVSFQAKPWEILAIVGPSGAGKSSLLEILAGKHTPQKGSVLLNQKPVDKSQFRKLSGYVTQKDTLFPLLTVEETMMFSARLRLKLPQQQLCSRVKSLIQELGLDHVAGTRIGDDRVRGISGGERRRVSIGVEIVHDPKVLILDEPTSGLDSTSALQIIDMLKVMAETRGRTIILSIHQPGFRIVKLFNSLLLLANGSVLHHGSADLMSLNLRLMGLELPLHVNVVEFAIDSIDTIQRQQQCQVETETPRLLQGTMQQKKGADNEQQPGESKIGKFTLQQLFQQSKVIDEDIINNKGTGMDFSYDFANSRLRETMILTHRFSKNIFRTRELFACRTIQMLISGLVLGSIFCNLKDDLKGTEEKVGLFAFILTFLLSSSIEALPIFLQEREILMKETSCGSYRVSSYAIANGLVYLPFLLILAILFTVPLYWLVGLNTDFTAFLHFLLLIWLVLYTANSVVVCFSALVPNFIVGNSVINGVIGSFFLFSGYFISNHEIPNYWIFMHYISLFKYPFEGFLINEFSNSKKCLEYMFGACVMKGEDVLKEEGYGGEGSRWKNVGVTVGFIMVYRFISYVILRYKCSERRV* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1034 649 CDD ABCG_EPDR 62 266 - -
Psa7g1034 649 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 1 642 - -
Psa7g1034 649 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 60 269 IPR027417 -
Psa7g1034 649 MobiDBLite consensus disorder prediction 312 332 - -
Psa7g1034 649 Pfam ABC transporter 63 211 IPR003439 GO:0005524
Psa7g1034 649 PANTHER ABC TRANSPORTER G FAMILY MEMBER 5 1 642 - -
Psa7g1034 649 ProSitePatterns ABC transporters family signature. 183 197 IPR017871 GO:0005524
Psa7g1034 649 Gene3D - 52 318 IPR027417 -
Psa7g1034 649 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 41 284 IPR003439 GO:0005524
Psa7g1034 649 SMART AAA_5 72 290 IPR003593 -
Psa7g1034 649 MobiDBLite consensus disorder prediction 26 55 - -
Psa7g1034 649 Pfam ABC-2 type transporter 377 585 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1034 Psa-Chr7 77668084 77670033 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1034 62 269 Calmodulin-binding Proteins AT2G36910 27.103 7.44e-13 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1034 K05681 - gmx:100789722 1062.75