Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1025 ATGGATGATGAAATTCATCCTACTTTGCCAAATGGATTCACCACAGAAATTCCTGAACCTCAATGTTTAAAAACAATCAACAACAATAACAATAACACTACAACCAATAAAGAACAAGACCGTTTTCTTCCCATAGCAAACGTTGGTAGAATAATGAAAAAAGTGATTCCAGCAAACGGAAAAATCTCAAAGGACGCAAAAGAAACAGTTCAAGAATGTGTTTCGGAGTTCATAAGTTTCGTCACCGGCGAAGCCTCGGATAAATGTCAAAGAGAAAAGAGAAAAACCATCAATGGTGATGATATTATTTGGGCTATTACAACTTTAGGTGTATATACTTCAACAAATCTCATTACTCAACCTTCTTATGTCGCCAACGATCAACCGTTTCCGTTACCTTTCTCGTCTAATTCAATTCAAAAACAGTTACGGCCGCAAGATCAGATCGATTCCATAGGCCATTGGTATGAATGA 474 0.3692 MDDEIHPTLPNGFTTEIPEPQCLKTINNNNNNTTTNKEQDRFLPIANVGRIMKKVIPANGKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDIIWAITTLGVYTSTNLITQPSYVANDQPFPLPFSSNSIQKQLRPQDQIDSIGHWYE* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1025 157 PRINTS CCAAT-binding transcription factor subunit A signature 70 88 - -
Psa7g1025 157 PRINTS CCAAT-binding transcription factor subunit A signature 89 107 - -
Psa7g1025 157 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 4 112 IPR027113 GO:0001228|GO:0006355|GO:0016602
Psa7g1025 157 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 42 106 IPR003958 -
Psa7g1025 157 Gene3D Histone, subunit A 29 123 IPR009072 GO:0046982
Psa7g1025 157 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-7 4 112 - -
Psa7g1025 157 ProSitePatterns NF-YB/HAP3 subunit signature. 73 89 IPR003956 GO:0005634|GO:0006355|GO:0043565
Psa7g1025 157 SUPERFAMILY Histone-fold 25 111 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1025 Psa-Chr7 77481043 77481684 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1025 27 110 CCAAT-HAP3 Transcription Factor Family AT2G13570 94.048 5.10e-51 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Psa7g1025 CBFD_NFYB_HMF 1.6e-27 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1025 K08065 - gmx:100780647 215.698