Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1017 ATGCAAGGTGCATTAGAGTTACCACCTGGCTTCAGATTTCATCCTACTGATGATGAGCTTGTGAATCATTATTTATGTAGAAAGTGTGCTTCTCTCCCAATCTCTGTTCCTATTATCAAAGAAATTGATTTGTATAAGTTTGATCCATGGCACCTTCCAGAAATGGCTCTTTACGGTGAGAAAGAATGGTATTTTTTCTCTCCCAGGGACCGGAAATACCCAAACGGTTCACGGCCGAACCGGGCGGCCGGAACCGGTTACTGGAAAGCCACGGGAGCCGATAAGCCGATTGGAAAGCCGAAGGCGCTTGGGATTAAGAAAGCACTTGTTTTCTACGCCGGGAAAGCTCCTAAAGGAGTTAAAACGAATTGGATCATGCATGAATATCGTCTTGCAAACGTTGATAGATCCGCATCAAAAAATAACCACAATTTAAGACTTGATGACTGGGTGTTGTGTCGAATATACAACAAGAAAGGGAAGATTGAGAAATACAGCGATGGAAATAGTACAAAAGAATCATCAATGTTTTCTGAGGAAGTTCAATTTGAGAATGAGACGAAGCCTAAGATTGAAACGAACGGTCAAGATGATTTCGGGATTATGAACGAGCAGTTATATACTGACACGTCAGATTCGGTGCCACGGTTTCACACGGATTCAAGCGGTTCAGAGCACGTGGTTTCGCCGGATGTCACGTGCGATAAGGAGGTTCAAAGTGAGCCAAAATGGAACGAATTTGTTCTGGGGCCTGATCCAGTGTCGGCCTTTGATTTTCAGTTGAATTTTATGGACGATGGGGAAGATGACCCTTTTGCCCCTCAGGTTCAGTATCAAATGAATCAACTTTCTGGCTGGCAAGATGTGTTTACGTACCTACCCAAGTAA 888 0.4369 MQGALELPPGFRFHPTDDELVNHYLCRKCASLPISVPIIKEIDLYKFDPWHLPEMALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGKPKALGIKKALVFYAGKAPKGVKTNWIMHEYRLANVDRSASKNNHNLRLDDWVLCRIYNKKGKIEKYSDGNSTKESSMFSEEVQFENETKPKIETNGQDDFGIMNEQLYTDTSDSVPRFHTDSSGSEHVVSPDVTCDKEVQSEPKWNEFVLGPDPVSAFDFQLNFMDDGEDDPFAPQVQYQMNQLSGWQDVFTYLPK* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1017 295 PANTHER NAC DOMAIN-CONTAINING PROTEIN 2-LIKE 5 273 - -
Psa7g1017 295 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
Psa7g1017 295 ProSiteProfiles NAC domain profile. 7 158 IPR003441 GO:0003677|GO:0006355
Psa7g1017 295 PANTHER NAC TRANSCRIPTION FACTOR 56 5 273 - -
Psa7g1017 295 Gene3D NAC domain 16 164 IPR036093 GO:0003677|GO:0006355
Psa7g1017 295 SUPERFAMILY NAC domain 3 158 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1017 Psa-Chr7 77140813 77141903 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1017 1 295 NAC Transcription Factor Family AT1G01720 61.409 6.90e-119 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Psa7g1017 NAM 5.6e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1017 - - gmx:100170751 487.648
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g1017 7 77140813 77141903 Psa7g1017 7 77140813 77141903 ECH
Psa7g1017 7 77140813 77141903 Psa5g1368 5 107006307 107008217 ECH