Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1011 ATGGATTTGCTTGGACCTAGTCTTGAAGATCTTTTTAACTTTTGTAGTAGAAAGTTATCACTAAAGACAGTTCTTATGCTTGCTGATCAAATGATTAACCGGGTTGAGTTCATTCATACAAAATCATTTCTACACCGAGATATCAAACCGGATAATTTTCTAATGGGGTTAGGAAGGCGTGCGAACCAGGTTTATGCTATTGATTTTGGTCTGGCTAAGAAATACAGAGATAGTTCAACCCATCAACACATTCCTTACAGGGAAAATAAAAATTTGACCGGAACTGCAAGATATGCTAGCACGAATACTCACCTTGGCATTGAACAAAGTCGAAGAGATGATTTAGAGTCTCTTGGTTATGTTTTAATGTACTTCCTGAGAGGGAGTCTTCCTTGGCAGGGACTTAAAGCAGGAACCAAGAAACAGAAGTATGAGAGAATTAGTGAAAAAAAGGTTTCTACATCGATTGAAGCCTTGTGTCGGGGTTATCCAACAGAATTTGCATCTTACTTCCATTACTGTCGCTCATTAAGGTTTGATGATAAGCCAGATTACGCTTATCTCAAAAGGATATTCCGTGATCTGTTTATTCGTGAAGGATTCCAGTTTGATTACGTGTTTGACTGGACCATCTTGAAGTATCAGCAATCACAGCTTGCCACACCTCCAGCACGGGCCATTATACCTGGTACTGGAACCAGTTCTGCAATGCCACCTGCTGTTACCAATGCTGACAGACATACAGGAGCAGAAGAAGGGCAACCCCCTGGTTTGGTATCAGTGGATTCCTCGAGGCGCAGAATGTCAGGACCCATTTTGAATACTCTATCAAGTGCCAATGTCTTGGGTCAGTCAAGTGGATCGGCCAGGCGAGTTGCTGTTTCTAGTAGTCGTGATGCATTTGTTGGTGCTGAATCAGATGTCCGTACACGCACTGCTGAGGCTAGCCCTGGAGCAGCACATAGAATTTTGGGTGGGCAAAGAAGTTCACCGATTGGGTCTTCTGATCCTCAGAGAGTAACACGGGCTGGAAGAAATGCTTCTCAAGCCAATAATTATGAAAGTGCCCTTAGGGGCATGGACGGTTTGCAGTTAGAAAATGACGAGAGGACCCATTATTAA 1122 0.4305 MDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFIHTKSFLHRDIKPDNFLMGLGRRANQVYAIDFGLAKKYRDSSTHQHIPYRENKNLTGTARYASTNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYERISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQSQLATPPARAIIPGTGTSSAMPPAVTNADRHTGAEEGQPPGLVSVDSSRRRMSGPILNTLSSANVLGQSSGSARRVAVSSSRDAFVGAESDVRTRTAEASPGAAHRILGGQRSSPIGSSDPQRVTRAGRNASQANNYESALRGMDGLQLENDERTHY* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1011 373 MobiDBLite consensus disorder prediction 328 355 - -
Psa7g1011 373 Pfam Protein kinase domain 10 143 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g1011 373 SUPERFAMILY Protein kinase-like (PK-like) 1 209 IPR011009 -
Psa7g1011 373 SMART serkin_6 1 206 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g1011 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 43 55 IPR008271 GO:0004672|GO:0006468
Psa7g1011 373 PANTHER CASEIN KINASE-RELATED 1 355 - -
Psa7g1011 373 MobiDBLite consensus disorder prediction 308 373 - -
Psa7g1011 373 ProSiteProfiles Protein kinase domain profile. 1 197 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g1011 373 PANTHER CASEIN KINASE I-LIKE 1 355 - -
Psa7g1011 373 Gene3D Transferase(Phosphotransferase) domain 1 1 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1011 Psa-Chr7 76923337 76930125 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1011 19 201 MAP Kinase Kinase Kinase AT1G62400 27.027 3.69e-10 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Psa7g1011 Pkinase 4e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1011 K02218 - gmx:100785851 695.656