Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1007 ATGCTTCTTTTGTGCTGGGCGGAAGTACTATACTTCATTACTCTACATTATGAGCAAATCTATTATTTTAAAGCTCATAATTGGACTCATGCAGCTTCAGAGTCCATCATCACGCCCAGTTCCTGCTCTGAAGATGCCGTTTTCACATCCTTCATTGAAGTTCAACAGCTGTCGTTCAAGCCGTTAAATAACAAACACGCCAGGCTAAAACCTCTTAACCAAGGAAGGACGGAGATCAGTAGGACCATCGGTGAACTCTGGAACAAGTTAAATGAATCTGAAAAAGCAGTAAGGAATTTGTTTATCTTACAGAATGGAATAAACCATAAAATGTTTATCAAGAACAAGCGCATGAAGGACAAAGAGAGGTACAAAACAGAAATGGAGTGTTACCGTGAGAAGCAAGGAAGAACTGCTGAAGCTGAAGTTGAGTTTGAAAGGCTTCTGGGTGTATCCGAAGCAAAGTTTGCAATTCACAGTTATCCAAGGTATCCAAAAGTCAATTTTATTCACGACGAGTTCGTTTTGCAGTTGTTTTTATTGGATCAACCCTATTGCTTTACAACAGCTATCTGGCGAATATCAATAACCATTCAAGCCACAGGAGCAAGTTCACATTTACTAAGACAAGGAGCTCTGTACTATCTGTTGGTGCATGCTAATGTAAGTCTGTATTCCTTGTTGGGTTACTGTTCTTGCGTTTACTGTAGAAAACTGGTCACAACTGCTTTACTCAATGTTTGCTACATTCTGCATGATGGCAGTAATCTTTTAAAAAGAAATGTGGTGGAAACCAAGGGAAATCACTTCAAAGAAATTGAGATAGCACTTCATTCCCCAAGACTAGAGCTTCTTACAAAACGACATTCACTGCAGTAA 879 0.3936 MLLLCWAEVLYFITLHYEQIYYFKAHNWTHAASESIITPSSCSEDAVFTSFIEVQQLSFKPLNNKHARLKPLNQGRTEISRTIGELWNKLNESEKAVRNLFILQNGINHKMFIKNKRMKDKERYKTEMECYREKQGRTAEAEVEFERLLGVSEAKFAIHSYPRYPKVNFIHDEFVLQLFLLDQPYCFTTAIWRISITIQATGASSHLLRQGALYYLLVHANVSLYSLLGYCSCVYCRKLVTTALLNVCYILHDGSNLLKRNVVETKGNHFKEIEIALHSPRLELLTKRHSLQ* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1007 292 CDD HMGB-UBF_HMG-box 62 129 - -
Psa7g1007 292 Gene3D High mobility group box domain 51 144 IPR036910 -
Psa7g1007 292 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 71 132 IPR009071 -
Psa7g1007 292 PANTHER HIGH MOBILITY GROUP B PROTEIN 9 63 97 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1007 65 135 ARID Transcription Factor Family AT1G04880 52.778 5.32e-15 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1007 - - cmax:111494342 72.7886