Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1005 ATGTTGGGTGACGCCACCAACTGGAACGAAGATGAATACAGAGAAACCGTTTTAAAGGAAAGAGAGATTCAAACCCAAACCGTTTTTAGAACTGCTTGGTCTCCCTCTCAATCTCAATCTCAAACTCAAACCCCTAATCTCAACTCTCTCATCGTCGCCTCCAGCGACGGTTCCATCGCCTCTTACTCCATCTCTTCCACCGTCTCCGCTTCTAAGCTCAAAAATCCGTTTGGTTTTATCAATGCTGATACGGATAATTTATTGGCGGAGCCAGATTGCTTTTTTCAAGCGCATGATGGATCTGCGTATGATGTCAAATTCTATGGTGATGATGATAATGCTCTGTTGCTGAGCTGCGGTGATGATGGCCGGGTTCGAGGATGGAGATGGAAGGAACTTGCTAGCTCAAAATATCATATTACTTCAGAAGGAAATAATATCAAGCCCGTCTTTGATGTGGTAAATCCTCAACACAAAGGTCCTTGGGGTTCACTCTCACCTCTCCCTGAGAATAATGCTATTGCTGTTAATACTCGGGCGGGATCTGTTTTTGCTGCATCTGGTGATTCTTGTGCGTATTGTTGGGATGTGGAAACTGGTAAATTAAAAACAGTATTCAAGGGTCACTCTGATTACTTGCATTGTATTGTTGCTCGCAACTCATCCAATCAGATCATAACAGGTTCAGAGGATGGGACAACGCGGATTTGGGATTGCAAAAGTGGAAAGTGTATCCAAGTGATTGATCCAGCAAAACATTTGAAGTTAAAAGGACCTGTTTCATGGGTTGGCTCTGTTGCTTTAGATGCAAGTGAGAGTTGGTTGGCTTGCGGTAGTGGACGTAATATATCACTTTGGAACCTTCCTGCCTCAGAGTGCACATTAAATTTTATCACTCAAGCTTCTGTACAAGACATGTTATTTGACAATAATCAAGTTAGTTGGCTATCTCTTTCTTATCTCAGTTGTTTTCAACATTGTCATAGTCTTTGA 993 0.423 MLGDATNWNEDEYRETVLKEREIQTQTVFRTAWSPSQSQSQTQTPNLNSLIVASSDGSIASYSISSTVSASKLKNPFGFINADTDNLLAEPDCFFQAHDGSAYDVKFYGDDDNALLLSCGDDGRVRGWRWKELASSKYHITSEGNNIKPVFDVVNPQHKGPWGSLSPLPENNAIAVNTRAGSVFAASGDSCAYCWDVETGKLKTVFKGHSDYLHCIVARNSSNQIITGSEDGTTRIWDCKSGKCIQVIDPAKHLKLKGPVSWVGSVALDASESWLACGSGRNISLWNLPASECTLNFITQASVQDMLFDNNQVSWLSLSYLSCFQHCHSL* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1005 330 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 42 310 IPR011047 -
Psa7g1005 330 PANTHER THO COMPLEX SUBUNIT 6 HOMOLOG 10 313 IPR042626 -
Psa7g1005 330 SMART WD40_4 199 238 IPR001680 GO:0005515
Psa7g1005 330 SMART WD40_4 249 287 IPR001680 GO:0005515
Psa7g1005 330 SMART WD40_4 88 129 IPR001680 GO:0005515
Psa7g1005 330 SMART WD40_4 158 196 IPR001680 GO:0005515
Psa7g1005 330 SMART WD40_4 14 63 IPR001680 GO:0005515
Psa7g1005 330 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 206 238 - -
Psa7g1005 330 ProSiteProfiles Trp-Asp (WD) repeats profile. 206 247 IPR001680 GO:0005515
Psa7g1005 330 Gene3D - 7 150 IPR015943 GO:0005515
Psa7g1005 330 Pfam WD domain, G-beta repeat 95 128 IPR001680 GO:0005515
Psa7g1005 330 Pfam WD domain, G-beta repeat 201 238 IPR001680 GO:0005515
Psa7g1005 330 Pfam WD domain, G-beta repeat 256 287 IPR001680 GO:0005515
Psa7g1005 330 Gene3D - 157 328 IPR015943 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1005 127 243 Eukaryotic Initiation Factors Gene Family AT2G46290 28.205 9.03e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1005 K13175 K03257 gmx:100820024 507.679