Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1003 ATGAAAACCCTCTCTCTTTCGCCGTTGCTTGCTCCTACTCCTAGTGCCCTAGTTGGTAGCAGAGCTTTTGCAAACGCTTTAACTTTAACCGCAAAGTGTTTTCCCAAGCAACTTCAATTCCACTCTCGATGTGTTGTTTTCTCTACTCACTCGAGTTCAGCAACTCTATCTGTGGAATCACAAGTAGAAAAGAAGCAGGTTTTTGATGGAGATAAGGCTTCTTTGCTTGTTATGGAGCTCAGAAAGAATTTTGATTCAGGCAAGACTAAGAGTTACGAATGGCGGATTTCGCAATTGGAGTCCATAGCTAAGATGTTGGTAGAGAAAGAGGAGGAAATTATTGATGCTCTTGTTATGGACCTTTCTAAACCTAGAATGGAAGCATATATAACTGAGATTTTCCAGGCGAAATCTGCATGTAATGAAGCACTTCAAGACCTGAAACACTGGATGAAGCCTGAAAAGGTGAGCACTTCAATCACAACATTTCCATCATCAGCAGAGATTGTTTCAGAACCACTGGGAGTTGTGTTGATCATATCAACATGGAACTTTCCTATGTTATTATCATTGGATCCGGTCATTGGAGCCATTGCAGCAGGTAACACAGTGGTTTTGAAACCATCAGAAATTTCTCCCGCAACATCATCCCTGCTTGCAAATTTGCTAGAAAGTTATCTAGACAATTCTGCCGTAAGAGTTGTTGAAGGTGCTGTTCCTGAAACAACTTCGCTCTTGGAGCAGAAGTGGGATAAGATACTTTATACAGGTAGTGCTCGAGTAGGTCGCATTGTTATGGCTGCTGCTGCAAAGCATCTTACTCCAGTGATTCTGGAGCTTGGAGGAAAATGTCCAGCCGTTGTTGATTCAAATATCAATTTACAAGTCACTGCTAGGAGGATCATAGCTGGCAAATGGGGATGCAATAGTGGACAAGCATGCATTTCTGTTGATTATATCATCACAAGAAGAGACTTTGCCCCAACACTTATAACTGCTTTAAAAACTGAGTTGGAGGAATTTTTTGGGAAAGATCCGATCGAATCCAAAGGCATGTCTCGTATTGTGTCTCCTACTCAATTTGCACGACTTGTGAGACTCTTGGATGAGGATAAGGCATCTGATAAGATTGTTTTGGGAGGTCAGAGAGATGAGAAGACATTAAAGATAGCTCCAACTATCTTATTGGATGTTCCGGAAGAAGCTATGGTTATGCAAGAGGAGATATTTGGGCCAATATTACCAATTATTACTGTAGACAGCATAGAAGATAGCTTCAGTATAATAAAATCAAGGCCAAAACCTCTTGCTGCATATCTCTTCACAAACAATGAGCAGCTGAAGAAGGATTATGTTGATAAGATATCTTCTGGAGGAATGCTCATCAACGATGCTGTTGTGCATGTTGCAACTCGTGGATTGCCTTTTGGAGGAGTTGGAGAAAGTGGAATGGGCGCTTACCATGGAAAGTTCTCTTTTGATAGTTTCAGCCATAAGAAGTCAGTTTTATATAAAGGTTTTGATTCAGATCCATCCATAAGGTATCCACCATACACGCCTGAGAAGGCGAAATTGTTGAGGGCCATTTTAGATGGTAGTATTTTTCACATTATTCTTGCTTTGCTTGGATGGTCTAAATAA 1641 0.4083 MKTLSLSPLLAPTPSALVGSRAFANALTLTAKCFPKQLQFHSRCVVFSTHSSSATLSVESQVEKKQVFDGDKASLLVMELRKNFDSGKTKSYEWRISQLESIAKMLVEKEEEIIDALVMDLSKPRMEAYITEIFQAKSACNEALQDLKHWMKPEKVSTSITTFPSSAEIVSEPLGVVLIISTWNFPMLLSLDPVIGAIAAGNTVVLKPSEISPATSSLLANLLESYLDNSAVRVVEGAVPETTSLLEQKWDKILYTGSARVGRIVMAAAAKHLTPVILELGGKCPAVVDSNINLQVTARRIIAGKWGCNSGQACISVDYIITRRDFAPTLITALKTELEEFFGKDPIESKGMSRIVSPTQFARLVRLLDEDKASDKIVLGGQRDEKTLKIAPTILLDVPEEAMVMQEEIFGPILPIITVDSIEDSFSIIKSRPKPLAAYLFTNNEQLKKDYVDKISSGGMLINDAVVHVATRGLPFGGVGESGMGAYHGKFSFDSFSHKKSVLYKGFDSDPSIRYPPYTPEKAKLLRAILDGSIFHIILALLGWSK* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1003 546 PIRSF ALDH 54 541 IPR012394 GO:0006081
Psa7g1003 546 SUPERFAMILY ALDH-like 80 518 IPR016161 GO:0016491
Psa7g1003 546 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 282 482 IPR016163 GO:0016620
Psa7g1003 546 Pfam Aldehyde dehydrogenase family 81 502 IPR015590 GO:0016491
Psa7g1003 546 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 81 500 IPR016162 GO:0016491
Psa7g1003 546 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 3 MEMBER I1, CHLOROPLASTIC 44 546 - -
Psa7g1003 546 PANTHER ALDEHYDE DEHYDROGENASE 44 546 IPR012394 GO:0006081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1003 Psa-Chr7 76756349 76760975 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1003 33 546 Aldehyde Dehydrogenase Gene Family AT4G34240 63.619 0.0 671
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1003 K00128 - gmx:100800699 843.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g1003 7 76756349 76760975 Psa7g1003 7 76756349 76760975 ECH