Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1002 ATGGGCAAGGAAAATGAGCCAGATATGAAAAAGGAAGAAGTTGGGGATGATGGTTCCTCGCGTGTGGAGACCGGGGATTTAGAATCTCGTTCTCGACTTAGTCTAGAGAGGGAAATGGGATTGCCGTGTTGTCGCGTGTGCCAGTGTGCTGAGTCTGATAAGCGGGGAGATGCTGCCCTAGAGTTTTTGGGCATTACACCGGTTATAGAAAGTAAGCGGGAAGTAAAGTTTGACGACAAGGGAATTCCAAAAGATACGGATCTTAACAGAAACTTCGAAAGCAAAGCGGGGACGATGGAATTTGTTGGCCCTGATGGGGAGGTTTTCGTATGTAAGAACGATTTGGAAAATGGTTTATCTCATGAAGATACGTTACTAGAACTTGGTTGTTCTTGTAAAAATGACCTTGCTTTGGTACACTATGCTTGTGCACTCAAGTGGTTTATCAACCATGGATCTACCATTTGTGAAATATGTGGACATGTAGCAAATAATATCAAAATATCTGACTTCAACAAGGTTGTTGGTTCTTTGAAAGAGTATGAAGCATTGAGGGAAAGAACTGTCAATGGAGATCCTGGTCCTGCACAAGATCGTCCAAATGCTAGTGTGGATCCTGATGCCGTGGCTGCTATCCGGAGGCAACGATTGAGTGAAATTGCACTATGGTTTTGTCCTCATAATAGCAGTAACTTTAACGACAATAGCAATGCGGACTCAGTTTCACAGCTTGTTTCTCAACAGCCTTTGAATATTTTTATCGAAGAAGCTGGACCCGAACAGAACACTGCAACTAAGTGGGCTGTAGAAGGTACCGGGATCCTGCTTGCTACAGGGCTGCTTACCATCACCCTTGCATGGCTTATAGCTCCTCGTGTTGGGAAGAAAACTGCAAGAAGTGGTCTTCATATCCTACTTGGAGGCGTTTGTGCTTTAACAGTGGTGATTTTTTTCCGCTTCTTTGTGCTTACCAGAATCAAGTATGGACCTGCACGATATTGGGCAATATTGTTTGTTTTCTGGTTTCTTGTCTTTGGAATATGGGCTTCTCGGGCACACAGTGCCAATACAACATGA 1077 0.4392 MGKENEPDMKKEEVGDDGSSRVETGDLESRSRLSLEREMGLPCCRVCQCAESDKRGDAALEFLGITPVIESKREVKFDDKGIPKDTDLNRNFESKAGTMEFVGPDGEVFVCKNDLENGLSHEDTLLELGCSCKNDLALVHYACALKWFINHGSTICEICGHVANNIKISDFNKVVGSLKEYEALRERTVNGDPGPAQDRPNASVDPDAVAAIRRQRLSEIALWFCPHNSSNFNDNSNADSVSQLVSQQPLNIFIEEAGPEQNTATKWAVEGTGILLATGLLTITLAWLIAPRVGKKTARSGLHILLGGVCALTVVIFFRFFVLTRIKYGPARYWAILFVFWFLVFGIWASRAHSANTT* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1002 358 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 21 357 - -
Psa7g1002 358 SMART ringv_2 110 160 IPR011016 GO:0008270
Psa7g1002 358 ProSiteProfiles Zinc finger RING-CH-type profile. 103 166 IPR011016 GO:0008270
Psa7g1002 358 PANTHER ZINC FINGER, RING-CH-TYPE 21 357 - -
Psa7g1002 358 SUPERFAMILY RING/U-box 122 163 - -
Psa7g1002 358 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 108 163 IPR013083 -
Psa7g1002 358 MobiDBLite consensus disorder prediction 1 33 - -
Psa7g1002 358 Pfam RING-variant domain 122 159 IPR011016 GO:0008270
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1002 1 348 C3H Transcription Factor Family AT5G08750 62.465 3.04e-151 429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g1002 7 76742613 76746768 Psa7g1002 7 76742613 76746768 ECH