Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0980 ATGCGTTTGGCCAATGATGCTACTTTTGTGAGAGCTGCTTTCCATATTTATACAGGACATCGCCGCAGTTATTGTCGCTTTTCTCATTGGTGTTTCGCTTCTACTTTGGTACACCGCAATATGTATAAAAAAGGTTATGTGGATGCACCTACTGCCCTCAAGGAGTACATTGTTTTCTCATTTGCTACATTTGCACTCGTGGAGCCTTTTGGACTGGCTCTTTACATACCTCAAGTTTCACAAACCATAAGACTTATTTCACCTTACTCACTTCACTTCACCAAACCTGCATTAACAATCCAGCAGTCAACATTCAATCGTGACAGCATAACAGATGGGCAAACCGCATTTCAAAACCTGCAATACATCCAGCCTAAAAAAGGAAAGTATGAGAATGAGGTGGAATTGTTAAGTGAAATTCAACATCCAATTGTAATTTCTCTACTTGGTGGTGGGACTCATGAGGATTCGAGGTTTATTATCTATGAGTTGATGCAAAATGGATCATTGGAAAGTCAATTACCTGGACCTTCTCATGGCTCTGCATTGGCATGGCACATGAGAATGAAGATTGCTCTTAACACAGCAAGAGGCTTGAAGTATCTGCATGAGCACCGTTATCCTGCAGTGATCCATAGAGATCTGAAATCTTCTAATATTCTTTTAGATACAAACTTCAACCTACAGGCCACAAACATGGATGCGTGGAAGATAAATAGAGAGAAAGACAATCAGAAAGGGGGCGGCCATTGTTCGAAAAAAAAAGAAAAAAACACTAAAGAAATTGAAACGGAGGCGAGTCTAAAGAACCTGGAGGCGGAGTTGCTTGGAGGAACCCTAGAGCTTCATCTCGCTACCGTTTGGACGAAAGCTTATTCCGAAGGAAGAGAAGAGAGTAAGCGCAGCGGAGTGGAATCGACTGACGAAGGAGCGAAAGATCCAAGAGTCTCCAGTCCAATCGCCGTTGATCTCCTTGTAACCGGTAATCTCCCTCGTACTCTCGCTTTGGGTGTCCGACCTCATCTCGACCGATGTTGGCCACCCCTTTCTTTTCTTGATTGA 1062 0.4313 MRLANDATFVRAAFHIYTGHRRSYCRFSHWCFASTLVHRNMYKKGYVDAPTALKEYIVFSFATFALVEPFGLALYIPQVSQTIRLISPYSLHFTKPALTIQQSTFNRDSITDGQTAFQNLQYIQPKKGKYENEVELLSEIQHPIVISLLGGGTHEDSRFIIYELMQNGSLESQLPGPSHGSALAWHMRMKIALNTARGLKYLHEHRYPAVIHRDLKSSNILLDTNFNLQATNMDAWKINREKDNQKGGGHCSKKKEKNTKEIETEASLKNLEAELLGGTLELHLATVWTKAYSEGREESKRSGVESTDEGAKDPRVSSPIAVDLLVTGNLPRTLALGVRPHLDRCWPPLSFLD* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0980 353 PANTHER BNAA04G14780D PROTEIN 126 234 - -
Psa7g0980 353 PANTHER OS01G0750732 PROTEIN 126 234 - -
Psa7g0980 353 ProSiteProfiles Protein kinase domain profile. 59 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g0980 353 ProSitePatterns Serine/Threonine protein kinases active-site signature. 210 222 IPR008271 GO:0004672|GO:0006468
Psa7g0980 353 MobiDBLite consensus disorder prediction 295 315 - -
Psa7g0980 353 Coils Coil 254 274 - -
Psa7g0980 353 Pfam Protein kinase domain 126 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g0980 353 MobiDBLite consensus disorder prediction 295 312 - -
Psa7g0980 353 SUPERFAMILY Protein kinase-like (PK-like) 129 229 IPR011009 -
Psa7g0980 353 SMART tyrkin_6 110 352 IPR020635 GO:0004713|GO:0006468
Psa7g0980 353 Gene3D Transferase(Phosphotransferase) domain 1 106 264 - -
Psa7g0980 353 MobiDBLite consensus disorder prediction 241 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0980 Psa-Chr7 75390013 75393118 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0980 129 233 Receptor kinase-like Gene Family AT1G80640 57.143 1.09e-36 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Psa7g0980 Pkinase 1.6e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0980 - - gmx:100812044 162.54