Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0972 ATGTTGTCCCCAAATTCTTCTAGCAAGGTTGCTTTCAGAATATTTATGAGGTGGTTCATATTCATAGTTGTCTTGAAACTTAGTTCTTCAATCAAAGATCCTGATATAGAAGGTGAAGCTCTGCTTGATCTTTTAAATAGTCTCAATGATTCAAATAATCAAATAAAAGATTGGGATAGTCATTTAGTGAGCCCTTGTTTCAGTTGGTCACATGTAACTTGTAGAAATGGACATGTCATATCTCTGACTCTGGCTTCAATTGGATTTTCTGGAACACTTTCTCCCTCGGTTACCAGATTGAAATATTTGGTTAACTTAGAATTGCAGAACAACAATCTTTCAGGTCCTTTACCCGATTACATTGCCAACTTGACATACCTACAATATCTAAATCTTGCTAACAATAATTTCAATGGTTCGATACCAACTACATGGGCTCAACTATCTAATCTCAACAACGTGGATCTTTCGTCTAATGATCTTACCGGAACTATCCCAACCCAACTCTTTTCGGTTCCGATGTTTAATTTTTCGGATACGCACCTTGGTTGCGGCTCTCGCTTCGAGCAGTCTTGTGTTTCTAAATCTGATCGTCCAGATTCAACCGGCAAATCAAAATTGGCAAAAGTCGTGCGATATGCGAGCTGTGGTGCATTTGCACTTCTGATTCTCGGGGCCATCTTTACGTATAGACACCATCAAAAGGATAGACACAAAAATGATGTCTTTGTAGATGTTTTAGGTGAAGATGAGAGCAAAGTTTATTTTGGCCAATTAAGAAAGTTTTCTTTGCGCGAACTCCAACTTGCGACTAAAAATTTCAGCGAAAGCTGTGTAATTGGCCAAGGTGGCTTTGGAAAAGTGTACAAAGGAATTCTCTCGGATAACACAAAAGTCGCGGTGAAACGTCTCACTGATTATCATAATGCTGGTGGAGAGGCTGCATTTGAGAGAGAAGTTGATCTCATTAGTGTTGCAGTTCATAGAAACCTTCTAAGACTAATTGGATTCTTTTCAAGCTCGACTGAAAGAATCCTTGTATATCCTTTCATGGAGAATCTAAGCGTAGCGTATCAATTAAGAGATTTGAAATCTGATGAGAAAGGCTTAGATTGGGCAAAAAGAAAGCGTGTGGCTTTCGGTACTGCACACGGTTTGGAATATCTACACGAGCAATGCAATCCGAAGATAATTCACCGTGATCTAAAGGCTGCAAATATCCTTCTAGATGACGAGTTTGAACCTGTTCTCGGTGATTTTGGATTAGCCAAACTGGTTGATGCACGGATGACTCATGTTACCACTCAAGTGCGTGGTACAATGGGTCATATTGCCCCGGAATATTTGTCAACTGGAAAATCATCCGAGAAAACAGATGTTTTTGGATACGGCATAACACTTCTCGAACTTATCACTGGTCAGCGTGCTATTGACCTCTCTCGGCTCGAAGAGGAGGAAGACGTACTTCTCATTGATCATGTAAAAAATCTATTAAGAGAAAATAGGCTGGAGGACATAGTGGATAACAATTTGGACACGTATGATCCGAAAGAAGTCGAAACCATTCTTCAAGTCGCATTACTTTGCACCCAATGCTACCCCGAGGATCGTCCGACGATGTCCGAGGTCGTAAAAATGTTGCAGGGAGTCGGATTAGCAGATCGATGGGCGGACTGGAAACAACTCGAAGAGGCTAGAAATCAAGAAATAGAATTGTCACTCATGACTCATCAATTTCCTTGGAGTGATGAATCAACTCTTGATCAAGAAGCTATACAACTTTCAAGAGCAAGATAG 1797 0.404 MLSPNSSSKVAFRIFMRWFIFIVVLKLSSSIKDPDIEGEALLDLLNSLNDSNNQIKDWDSHLVSPCFSWSHVTCRNGHVISLTLASIGFSGTLSPSVTRLKYLVNLELQNNNLSGPLPDYIANLTYLQYLNLANNNFNGSIPTTWAQLSNLNNVDLSSNDLTGTIPTQLFSVPMFNFSDTHLGCGSRFEQSCVSKSDRPDSTGKSKLAKVVRYASCGAFALLILGAIFTYRHHQKDRHKNDVFVDVLGEDESKVYFGQLRKFSLRELQLATKNFSESCVIGQGGFGKVYKGILSDNTKVAVKRLTDYHNAGGEAAFEREVDLISVAVHRNLLRLIGFFSSSTERILVYPFMENLSVAYQLRDLKSDEKGLDWAKRKRVAFGTAHGLEYLHEQCNPKIIHRDLKAANILLDDEFEPVLGDFGLAKLVDARMTHVTTQVRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELITGQRAIDLSRLEEEEDVLLIDHVKNLLRENRLEDIVDNNLDTYDPKEVETILQVALLCTQCYPEDRPTMSEVVKMLQGVGLADRWADWKQLEEARNQEIELSLMTHQFPWSDESTLDQEAIQLSRAR* 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0972 598 Gene3D Transferase(Phosphotransferase) domain 1 351 566 - -
Psa7g0972 598 SUPERFAMILY Protein kinase-like (PK-like) 252 548 IPR011009 -
Psa7g0972 598 Pfam Leucine rich repeat N-terminal domain 37 74 IPR013210 -
Psa7g0972 598 Pfam Protein kinase domain 277 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g0972 598 Gene3D Phosphorylase Kinase; domain 1 243 350 - -
Psa7g0972 598 ProSitePatterns Serine/Threonine protein kinases active-site signature. 397 409 IPR008271 GO:0004672|GO:0006468
Psa7g0972 598 PANTHER LRR RECEPTOR-LIKE KINASE 17 598 - -
Psa7g0972 598 Gene3D Ribonuclease Inhibitor 34 205 IPR032675 -
Psa7g0972 598 SUPERFAMILY L domain-like 38 173 - -
Psa7g0972 598 SMART serkin_6 274 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g0972 598 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 17 598 - -
Psa7g0972 598 Pfam Leucine rich repeat 103 161 IPR001611 GO:0005515
Psa7g0972 598 ProSitePatterns Protein kinases ATP-binding region signature. 280 302 IPR017441 GO:0005524
Psa7g0972 598 ProSiteProfiles Protein kinase domain profile. 274 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0972 Psa-Chr7 75029622 75033653 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0972 19 593 Receptor kinase-like Gene Family AT5G65240 54.711 0.0 630
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Psa7g0972 Pkinase 8.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0972 - - gmx:100799227 974.541