Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0959 ATGCTCCCTTTGAAGGAACTTGCCGATTCTATTGCTGAAAAACTGCAGGAACGTTTGTTTGTTGGTGCGGAACTTTATGGGAAAAAAGATGATGATGAACGTTTGTTTGTTGGTGCGGAACTTTATGGGAAAAAAGATGATGATGTATGTCCATGCAGAATATTAAAAGTCATCCAGGAAGGAGTCAACAAATGCCGATATGAGGTAGCCTGGCTTGACAAAAACAAGAATGTAAGTGAAAAAACAGAAATCTCTGCAGAAGATTTGGTGCAAAAGAAGCCGCTTTTTAGTAGAAATATTCTGAAGTCTTTTATCCGAGAATCTACATACAGAAATGCCCCTTGGGTTTTACATGACAAACTGGCACAAAATCAAGGTATCTCAACTGAAGTTCCTGAGGAGTTAAGAGGAAAGTTTTTTCTCAAAGACGGACTTATAGTTTGCTCCAAGAAAAGAAATAATGAGGAATCAATGGAGGAAGCTGATAAACTTAAAAAGAAGAAGTTGGATGGGACACTAGTCAATGGTTCTGCACGAGAGAAAGAAAATGTAGAACGCAAGGAGATACCAATCAAATACCCCATTGACGATCTATTGGTGAAGCCTAGTCCAGATGACCCTGTTTTCACTGACCGTCCTCCTCCGTCAAGAGACTTTAATGTTCCAATTCATTGTGTAGGGGATCTCTTAATGGTTTGGGATTTTTGTACTTCTTTTGGTAAACAGTTACACTTGTGGCCCTACTCTTTGGAAGATTTTGAAAATGCAATCTGCCATAAGGATAGCAATGTGGTTCTCCTTGTGGAATCTCATGCTGCACTTTTTCGAGTTCTTATCAAAGTTGATGGTGAATACACTTCAGTGGTTGAGAAACGGAAGTTGAAGAAGATAACAATTGTTAACTGGAGAGAATATTTATGTGATTTTCTAGAAATGATCAATATTCCTCGATTACGGAACTATGAAGCAACCATAAAACGGGGACATTATGGCCTTGTAGATGCCAATGCTAAATTAGAGCTCTTATCCGAGTTGGTCAATCGAGTCCTTGAAACTGCAGTTTTCAGGGAGAAGTTGGATATGTTTATTGAACAACGCCACAAACTTGAGGCCTCTAAAAGGGAAGAAGTACTAGAACTTGCTAGACAGAGAAGAGAAAAAAAAGAGAGGTTGAAAGCTGACTCAGAGAGCAACGGGCATCATTTAGTAGACAGTGCAGATATCCTAACAAACAATAACCACATTATGCAAAATGGACACATGGAAAAGAAAACAAATGGAGAGATAGAATCATCCAGGCAAGACAACTCACTGGGTAGTAGTGGGATTAAGCATTCAAGTCCTGCTTCAGAAAAGACTCCTAAAAATCTGGATTCAGAGCTGAAAGAACCACCAGAAAATGGAAAAGAAGTATCCAAAAAGAAATCATCAAAACAGTTGAAGGCGGTTAAGGATTCATCAGAGAAGAATAGTATAGAGCGGAGGAGAGAATACTTTGAACAGGAGATGGAGAAACGAACTATTCGTAGAAGCCCATTAGGTAAAGACCGAGATTACAATAGGTATTGGTGGTTCCGCCGCGATGGAAGGATATTTGTTGAAAGCTGTGACTCCAAGGAGTGGGGATACTACAGCACCAAGGAAGAGCTTGATGCATTGATGGGTTCACTGAATTGCAAGGGTGAGCGGGAAAGGGAACTGCAAAAACAACTGGAAAAAAATTATACTAGGATATGTTCAGAGCTGCAGAAAAGATCGAAGGATTTGATGCAGAATATTGACATTGACGAGTCTGTACTTCGAAGGTCTACTCGTGTTCGAGCTCCACCCAGGGAAAATCCTGCCAATGCTTTCCTCAAATACGTTAACAAGTGGAAAGGCGAGTAG 1887 0.4012 MLPLKELADSIAEKLQERLFVGAELYGKKDDDERLFVGAELYGKKDDDVCPCRILKVIQEGVNKCRYEVAWLDKNKNVSEKTEISAEDLVQKKPLFSRNILKSFIRESTYRNAPWVLHDKLAQNQGISTEVPEELRGKFFLKDGLIVCSKKRNNEESMEEADKLKKKKLDGTLVNGSAREKENVERKEIPIKYPIDDLLVKPSPDDPVFTDRPPPSRDFNVPIHCVGDLLMVWDFCTSFGKQLHLWPYSLEDFENAICHKDSNVVLLVESHAALFRVLIKVDGEYTSVVEKRKLKKITIVNWREYLCDFLEMINIPRLRNYEATIKRGHYGLVDANAKLELLSELVNRVLETAVFREKLDMFIEQRHKLEASKREEVLELARQRREKKERLKADSESNGHHLVDSADILTNNNHIMQNGHMEKKTNGEIESSRQDNSLGSSGIKHSSPASEKTPKNLDSELKEPPENGKEVSKKKSSKQLKAVKDSSEKNSIERRREYFEQEMEKRTIRRSPLGKDRDYNRYWWFRRDGRIFVESCDSKEWGYYSTKEELDALMGSLNCKGERERELQKQLEKNYTRICSELQKRSKDLMQNIDIDESVLRRSTRVRAPPRENPANAFLKYVNKWKGE* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0959 628 Pfam DDT domain 224 280 IPR018501 -
Psa7g0959 628 MobiDBLite consensus disorder prediction 431 454 - -
Psa7g0959 628 MobiDBLite consensus disorder prediction 455 494 - -
Psa7g0959 628 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 508 574 IPR028941 -
Psa7g0959 628 PANTHER BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN, 2A 1 626 - -
Psa7g0959 628 MobiDBLite consensus disorder prediction 425 494 - -
Psa7g0959 628 SMART testlast3 223 284 IPR018501 -
Psa7g0959 628 ProSiteProfiles DDT domain profile. 223 284 IPR018501 -
Psa7g0959 628 ProSiteProfiles WAC domain profile. 1 33 IPR013136 -
Psa7g0959 628 MobiDBLite consensus disorder prediction 388 407 - -
Psa7g0959 628 Coils Coil 374 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0959 Psa-Chr7 73689744 73695047 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0959 213 280 Homeobox Transcription Factor Family AT1G28420 38.961 5.79e-08 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Psa7g0959 WSD 9.2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0959 - - gmx:100789956 837.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g0959 7 73689744 73695047 Psa7g0959 7 73689744 73695047 ECH