Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0950 ATGGCATCTGCAATAGTTCGTAGAAACATCACCCACAACTTGAAAAAACTCCCGTTTTTATCTTCTTCGCTTTTCAATAGTAAGCACTTATTCAACGTTGAACCTTCCGGTTCCGTTTCCTTTCATTCAGAAACCGTTGCCGGTGGTGGTGGTGCTGGATTGCCATCTTACATGCGTGGAGCTGTTTATTGGGAACCTAACAAACCTCTCACCATTGAAGAATTTCACATTCCTCGCCCTAAAGCCGGTGAACTTCTCATCAAAACCAAAGCATGTGGAGTGTGCCACTCTGATCTTCATGTCATGAAAGCTGAAATTCCGTTTGCAACTCCTTGTGTTGTAGGGCATGAGATTACTGGTGAAGTTATTGAACATGGACAGAACACCGATTCCAAAACCATAGAAAGGCTTCCGGTTGGATCTCGAGTTGTTGGGGCCTTCATCATGCCTTGTGGTAATTGCTCTTATTGTTCAAAGGGCCATGATGATCTGTGTGAAGCTTTCTTTGCTTATAACCGGGCTAAAGGAACCCTCTACGATGGTGAAACTAGACTATTTCTTCGAAGCAGTGGAAAACCGGTATTCATGTATAGTATGGGAGGGCTTGCGGAATACTGTGTTGTGCCAGCAAATGCATTGGCTGTATTACCAAGCTCAATGCCATATACCGAGTCTGCAATTCTAGGATGTGCTGTTTTTACTGCTTATGGTGCTATGGCTCATGCGGCTGAAGTGCGTCCGGGTGATTCTGTTGCTGTTATTGGAACTGGGGGTGTTGGTTCTAGTTGTTTGCAGATCGCTAGAGCATTTGGTGCCTCGGATATAATTGCTGTTGATGTTCAGGATAATAAGCTAGAGAAAGCAAAAACACTCGGTGCTACTCACACTATAAATTCGGCAAAGGAAGATCCCATTGAAAAGATACTCGAAATTACTGGTGGAAAAGGCGTTGACGTTGCGGTTGAAGCCTTGGGATTACCACTGACATTTGCTCAGTGCACACAAAGTGTGAAGGATGGAGGAAAAGCAGTGATGATTGGACTGGCAAAAGCTGGTTCTTTAGGAGAGATCGATATAAATAGACTTGTTCGCAGAAAGATAAAAGTAATTGGGTCATATGGAGGCAGGGCTAGACAGGATCTTCCAAAGTTAATTAGATTAGCAGAAACAGGAATCTTCGACCTTGGCCATGCTGTTTCAAGAAAATACACTTTTGAGGAGTCTGGCAAAGCATTCCAGGATCTAAACGAAGGAAAAATCGTCGGCCGAGCTGTAATCGAGATCGTATAG 1290 0.4388 MASAIVRRNITHNLKKLPFLSSSLFNSKHLFNVEPSGSVSFHSETVAGGGGAGLPSYMRGAVYWEPNKPLTIEEFHIPRPKAGELLIKTKACGVCHSDLHVMKAEIPFATPCVVGHEITGEVIEHGQNTDSKTIERLPVGSRVVGAFIMPCGNCSYCSKGHDDLCEAFFAYNRAKGTLYDGETRLFLRSSGKPVFMYSMGGLAEYCVVPANALAVLPSSMPYTESAILGCAVFTAYGAMAHAAEVRPGDSVAVIGTGGVGSSCLQIARAFGASDIIAVDVQDNKLEKAKTLGATHTINSAKEDPIEKILEITGGKGVDVAVEALGLPLTFAQCTQSVKDGGKAVMIGLAKAGSLGEIDINRLVRRKIKVIGSYGGRARQDLPKLIRLAETGIFDLGHAVSRKYTFEESGKAFQDLNEGKIVGRAVIEIV* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0950 429 PANTHER NAD-DEPENDENT ALCOHOL DEHYDROGENASE 58 428 - -
Psa7g0950 429 CDD Zn_ADH10 58 427 - -
Psa7g0950 429 Pfam Zinc-binding dehydrogenase 258 389 IPR013149 -
Psa7g0950 429 Pfam Alcohol dehydrogenase GroES-like domain 83 213 IPR013154 -
Psa7g0950 429 SUPERFAMILY GroES-like 53 261 IPR011032 -
Psa7g0950 429 Gene3D - 235 372 - -
Psa7g0950 429 PANTHER NAD-DEPENDENT ALCOHOL DEHYDROGENASE 58 428 - -
Psa7g0950 429 SMART PKS_ER_names_mod 65 426 IPR020843 GO:0016491
Psa7g0950 429 Gene3D - 62 418 - -
Psa7g0950 429 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 220 393 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0950 Psa-Chr7 73193349 73196826 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0950 75 347 Monolignol Biosynthesis Gene Families AT4G37970 27.338 1.14e-17 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0950 - - gmx:100775182 731.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g0950 7 73193349 73196826 Psa7g0950 7 73193349 73196826 ECH