Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0939 ATGGAGACGAAAACACTCAGCTTTTTGTTCATGCTCTTCCTTCTCTTAGCAGCTGATTTTACGGTGAAGACAGCAGAGGCGAGAAAGTGTGTGTCTCAAAGCCACAGGTTTCACGGACCATGTTTGAGGGACAGCAACTGTGCAACGGTATGCTTGGGAGAAGGATTCACTGGCGGCGATTGTCACGGCTTTCGCCGCCGCTGTTTTTGCAGTAGGTTTTGTTAG 225 0.4933 METKTLSFLFMLFLLLAADFTVKTAEARKCVSQSHRFHGPCLRDSNCATVCLGEGFTGGDCHGFRRRCFCSRFC* 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0939 74 SMART gth_4 29 74 IPR003614 GO:0006952
Psa7g0939 74 ProSitePatterns Gamma-thionins family signature. 28 51 IPR008176 GO:0006952
Psa7g0939 74 PANTHER DEFENSIN-LIKE PROTEIN 1 1 74 - -
Psa7g0939 74 CDD Knot1 39 70 IPR003614 GO:0006952
Psa7g0939 74 PRINTS Purothionin signature 29 44 IPR008176 GO:0006952
Psa7g0939 74 PRINTS Purothionin signature 59 73 IPR008176 GO:0006952
Psa7g0939 74 SUPERFAMILY Scorpion toxin-like 28 74 IPR036574 -
Psa7g0939 74 Gene3D - 28 74 IPR036574 -
Psa7g0939 74 PANTHER DEFENSIN MTDEF4.7 1 74 - -
Psa7g0939 74 Pfam Gamma-thionin family 28 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0939 Psa-Chr7 72822894 72823397 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0939 7 74 Plant Defensins Gene Families AT2G02120 54.412 4.45e-23 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0939 - - aof:109836683 73.559