Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0938 ATGGCTAGATCTCCCTGCTGTGAAAAACAACACACTAATAAAGGCGCTTGGTCTAAAGAAGAAGATGAACGGTTGATAAAATACATCAAGTCTCACGGTGAAGGTTGTTGGCGTTCTCTTCCCAAAGCCGCTGGCTTGGCTCGTTGCGGCAAAAGTTGCAGACTTAGATGGATAAATTACCTCCGACCTGATCTCAAGCGAGGAAACTTCACTCGCGAAGAAGATGAACTTATCATTCGTCTCCATAACGAAGTTGGTAACAAATGGTCTCAGATTGCTCAACAATTGAAGGGAAGAACAGACAATGAGATCAAGAATTACTGGAATACACACATCAAGAGGAAACTCTACGGCCGCGGAGTTGATCCTTCAACGCATAAACCACTCAAACCCGCCTCCACCTCCGCCGTTGCTGGTGCTAGTACTTCCTCGACAACCACCGCCTCCGCCGTTGCTTCTTCAACAAATCTTATCAACAAACCGACTGTGATTCCTGTGGTCCCCACAACCAGTGGCAGTAGCGTAAGCCACAAGAGCTTGAACACTAAAAGCGTGTTTCCGTTATTCAGTTTCAACGGCGGTCTGGATAAAAAGCTAGTTGTAACTGATTCTGGTTGCGGCTTTCTGGATAAAAAGTTAGTTGTAACTGATTCTGATTGCGGCTTTCTGGATAAAAAGTTTGTTGTAACTGATTCTGGTTGTGGAGGTGTTGAGGATTCAGTTTCAAACACTAGCAGTGGTGTAACTATAGAGGAAACGCCTTATCCTCTTCAAATCAACTTGGAACTTTCATTGGCTCCACCATTTCAGCAGCCACAAGCGGTGGCACCATCACAAGGTGTGTGCCTTTGTAATCAAGTTTTAGGGTTCCATGGAAACGGACCTTGTTGCTGCATGAATACCAGGCCTACTACAAATGATGTTTCTGCGGCTGCTCCACCACCTACAACCACCGGTACCGGCAATGATTTTTTTAGATTTTTCGGTGCCAGGTTTATGAAGTTTTGA 1008 0.4524 MARSPCCEKQHTNKGAWSKEEDERLIKYIKSHGEGCWRSLPKAAGLARCGKSCRLRWINYLRPDLKRGNFTREEDELIIRLHNEVGNKWSQIAQQLKGRTDNEIKNYWNTHIKRKLYGRGVDPSTHKPLKPASTSAVAGASTSSTTTASAVASSTNLINKPTVIPVVPTTSGSSVSHKSLNTKSVFPLFSFNGGLDKKLVVTDSGCGFLDKKLVVTDSDCGFLDKKFVVTDSGCGGVEDSVSNTSSGVTIEETPYPLQINLELSLAPPFQQPQAVAPSQGVCLCNQVLGFHGNGPCCCMNTRPTTNDVSAAAPPPTTTGTGNDFFRFFGARFMKF* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0938 335 CDD SANT 69 112 IPR001005 -
Psa7g0938 335 Gene3D - 14 66 - -
Psa7g0938 335 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Psa7g0938 335 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Psa7g0938 335 CDD SANT 16 61 IPR001005 -
Psa7g0938 335 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Psa7g0938 335 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Psa7g0938 335 Gene3D - 68 137 - -
Psa7g0938 335 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Psa7g0938 335 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 268 - -
Psa7g0938 335 SMART sant 13 63 IPR001005 -
Psa7g0938 335 SMART sant 66 114 IPR001005 -
Psa7g0938 335 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Psa7g0938 335 PANTHER TRANSCRIPTION FACTOR MYB7 1 268 - -
Psa7g0938 335 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0938 Psa-Chr7 72735127 72737104 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0938 1 151 MYB Transcription Factor Family AT4G38620 71.523 4.85e-80 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Psa7g0938 Myb_DNA-binding 1.1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0938 K09422 - gmx:100808083 264.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g0938 7 72735127 72737104 Psa7g0938 7 72735127 72737104 ECH