Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0936 ATGGACGAAATTGGAGAATCCTCTGCTTCAGCCAAACCCTCAGCTTCAACCAAACCCTCAGATGAAATCTGGGCCAAGCTTGTTCAGTCAGACTCGAAATACTCAGATGTTGAGATAAGGTCAGATGAATGCGAAATATGTTCGGAGATATTAGCTACTTCTAGTGATAAACATAGCTGGTGCAAAATAGTAAGGAACTCTGATCTATGTTCTGCTACTATGGAAAATAAGAGTTCAAATACAATACTAGTTGATGGGGCTGAGTTGCGCAATGGTGACAATGTTGTTATCAAAGATGGAAGTGAAATCATCTCAGGCCCTGATAGAGAAGGCTTTGTCAGCTACAGATTCCAAATCACGTCTAGCCCAGAAACCCGCCAGAATCTGCTAAAGATAACTATAGATGTTGATCATGCAAAGTGTAGTATTTGCTTAAACCTATGGCATGATGTCGTGACTGTTGCTCCATGCCTTCATAATTTTTGCAATGGCTGCTTCTCACAATGGTTAAGGAGATCGCAGGAAAATCATTCGACTGTACTTTGTCCTCAATGCAGAGGAGTTGTTCATCTCGTTGGAAAAAACCACTTTCTGCGCGCCATTGCAGAGGATATGATCAGAGCTGATTCTTCCCTAAGACGCTCACAGGACGAAACCACTGTTTTAGATACATATGCATATGTTCGGTCAAACCTTCTCATTGGATATATAAAGAAGGGTCGAAAGAGGGCCAACACAACAACAGTTGATCAAAATGATGGCACCGATCATCACTGCCCACAGTGTGTTGCTAATGTTGGTGAGTTTCGATGCAACCACAACACTATTCATCTCCAATGTCAAGCATGTGGAGGAATGATGCCTTCCCGTAATGGTCTTCGTGTTCCTCAATATTGCTTAGGATGCGACAGACCATTTTGCGGAGCTTACTGGAATGATCAAGGGGTAACTAGGAGTAGCTCATATCCTGTGTGTTCCCGGGATATTTTAAAACCTATCTCAGAACACACTATCACAGGAATTCCTTTGTCAGCCCATGAAAAGAATCTGCACGAACAGAGTATCACTGAAAGTTGCATACGACTGATGGGGAGGACATTGCAGGATGTCATATCAGAATGGATAGTAAAGCTGAATAACAACGAAATTGATACAACACGGATGATGCTGAATCACGCAGAGATGATGACTGCTGGGACTCTAGTATGCAGTGATTGTTATGAGAAGTTGGTGTCATTTCTCTTGTACTGGTTTCGCATCTCTATACCGAAAGAGCTTCTCCCACCAGAAGCATCAGCAAGAGAAGATTGCTGGTATGGATATGCATGTCGAACACAGCACCGTAGCGAAGAGCATGCTCTGAAACGGAATCATGTTTGCCGTCCAACCAGAGGCACTTTCTGA 1404 0.4309 MDEIGESSASAKPSASTKPSDEIWAKLVQSDSKYSDVEIRSDECEICSEILATSSDKHSWCKIVRNSDLCSATMENKSSNTILVDGAELRNGDNVVIKDGSEIISGPDREGFVSYRFQITSSPETRQNLLKITIDVDHAKCSICLNLWHDVVTVAPCLHNFCNGCFSQWLRRSQENHSTVLCPQCRGVVHLVGKNHFLRAIAEDMIRADSSLRRSQDETTVLDTYAYVRSNLLIGYIKKGRKRANTTTVDQNDGTDHHCPQCVANVGEFRCNHNTIHLQCQACGGMMPSRNGLRVPQYCLGCDRPFCGAYWNDQGVTRSSSYPVCSRDILKPISEHTITGIPLSAHEKNLHEQSITESCIRLMGRTLQDVISEWIVKLNNNEIDTTRMMLNHAEMMTAGTLVCSDCYEKLVSFLLYWFRISIPKELLPPEASAREDCWYGYACRTQHRSEEHALKRNHVCRPTRGTF* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0936 467 PANTHER UBIQUITIN LIGASE PROTEIN CHFR 13 465 - -
Psa7g0936 467 SUPERFAMILY RING/U-box 136 191 - -
Psa7g0936 467 Gene3D - 5 129 - -
Psa7g0936 467 Gene3D - 182 316 - -
Psa7g0936 467 MobiDBLite consensus disorder prediction 1 21 - -
Psa7g0936 467 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 130 181 IPR013083 -
Psa7g0936 467 Pfam Ring finger domain 140 186 IPR001841 -
Psa7g0936 467 ProSiteProfiles Zinc finger RING-type profile. 141 186 IPR001841 -
Psa7g0936 467 Pfam Cysteine rich domain with multizinc binding regions 259 422 IPR040909 -
Psa7g0936 467 SMART ring_2 141 185 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0936 127 186 C3H Transcription Factor Family AT1G14200 37.879 7.31e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0936 K10644 - gmx:100805618 727.243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g0936 7 72270753 72275032 Psa7g0936 7 72270753 72275032 ECH