Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Psa7g0929 | ATGGAGAGATACGAGGTTGTTAAGGATTTGGGAGTTGGGAATTTTGGAGTGGCGAGGCTTCTGAGGAACAAGGAGACTAAGGAGCTTGTTGCTATGAAGTACATCGAGCGTGGCCATAAGATTGATGAGAATGTGGCTAGAGAGATTATCAACCATAGGTCTCTTCGGCACCCGAATATAATTCGGTTTAAGGAGGTGGTTTTGACTCCTACTCATTTAGCAATAGTGATGGAGTATGCAGCTGGAGGTGAACTCTTTGAGAGGATATGTAATGCTGGACGGTTCAGCGAAGACGAGGCTAGATATTTCTTTCAGCAGCTGATATCTGGTGTTCATTACTGTCATGCTATGCAAATATGTCATAGAGATTTGAAGCTGGAAAATACCCTTTTAGATGGAAGCCCTGCGCCTCGCTTGAAAATTTGTGACTTTGGTTATTCCAAGTCATCTTTGCTTCATTCCCGACCCAAATCGACTGTTGGAACTCCGGCTTATATAGCACCGGAGGTTCTTTCTAGGAGGGAGTATGATGGCAAGTTGGCTGATGTGTGGTCGTGCGGTGTGACCCTGTATGTCATGCTGGTCGGAGCATATCCCTTTGAGGATCAAGATGATCCTAGAAATTTTAGGAAAACAATTCAGCGCATAATGGCTGTTCAATACAAAATCCCTGATTATGTTCACATATCTCAAGATTGCAAACACCTTCTATCTCGAATATTTGTTGCAAATCCATTAAAGAGAATCTCTCTCAGGGAAATCAAAAACCATCCATGGTTTTTAAAGAATCTTCCAAGGGAGCTAACTGAATCAGCTCAAGCGGCGTACTACCAGAGAGGCAATCCAAGTTTTTCTATTCAAAGTGTGGACGAGATAAATAAAATTGTGGGAGAGGCGAGAGAGCCTCCTCCGGTATCTAGGCCGGTCAAAGGCTTTGGCTGGGAAGGCGAGGAAGAAGAAGAAGAAGTGGAAGAAGAAGAGGTGGAGGAAGAGGAAGAGGAAGAAGATGAGTATGACAAAAGGGTGAAAGAGGTTCATGCAAGTGGAGAATTTCAAATCAGTTAA | 1065 | 0.4357 | MERYEVVKDLGVGNFGVARLLRNKETKELVAMKYIERGHKIDENVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARYFFQQLISGVHYCHAMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPRNFRKTIQRIMAVQYKIPDYVHISQDCKHLLSRIFVANPLKRISLREIKNHPWFLKNLPRELTESAQAAYYQRGNPSFSIQSVDEINKIVGEAREPPPVSRPVKGFGWEGEEEEEEVEEEEVEEEEEEEDEYDKRVKEVHASGEFQIS* | 355 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Psa7g0929 | 354 | ProSitePatterns | Protein kinases ATP-binding region signature. | 10 | 33 | IPR017441 | GO:0005524 | |
Psa7g0929 | 354 | Gene3D | Transferase(Phosphotransferase) domain 1 | 80 | 268 | - | - | |
Psa7g0929 | 354 | PANTHER | SERINE/THREONINE-PROTEIN KINASE SRK2H | 2 | 347 | - | - | |
Psa7g0929 | 354 | SUPERFAMILY | Protein kinase-like (PK-like) | 2 | 288 | IPR011009 | - | |
Psa7g0929 | 354 | Coils | Coil | 314 | 348 | - | - | |
Psa7g0929 | 354 | MobiDBLite | consensus disorder prediction | 315 | 338 | - | - | |
Psa7g0929 | 354 | PANTHER | SERINE/THREONINE KINASE | 2 | 347 | - | - | |
Psa7g0929 | 354 | MobiDBLite | consensus disorder prediction | 303 | 354 | - | - | |
Psa7g0929 | 354 | ProSiteProfiles | Protein kinase domain profile. | 4 | 260 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Psa7g0929 | 354 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 79 | - | - | |
Psa7g0929 | 354 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 119 | 131 | IPR008271 | GO:0004672|GO:0006468 | |
Psa7g0929 | 354 | Pfam | Protein kinase domain | 4 | 260 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Psa7g0929 | 354 | SMART | serkin_6 | 4 | 260 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Psa7g0929 | 354 | CDD | STKc_SnRK2 | 3 | 259 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Psa7g0929 | Psa-Chr7 | 71504017 | 71507263 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Psa7g0929 | 3 | 263 | CBL-interacting serine-threonine protein kinases | AT2G26980 | 42.279 | 9.26e-68 | 217 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CAMK_OST1L | Psa7g0929 | Pkinase | 3.1e-71 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Psa7g0929 | K14498 | - | gmx:547968 | 652.129 |