Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0929 ATGGAGAGATACGAGGTTGTTAAGGATTTGGGAGTTGGGAATTTTGGAGTGGCGAGGCTTCTGAGGAACAAGGAGACTAAGGAGCTTGTTGCTATGAAGTACATCGAGCGTGGCCATAAGATTGATGAGAATGTGGCTAGAGAGATTATCAACCATAGGTCTCTTCGGCACCCGAATATAATTCGGTTTAAGGAGGTGGTTTTGACTCCTACTCATTTAGCAATAGTGATGGAGTATGCAGCTGGAGGTGAACTCTTTGAGAGGATATGTAATGCTGGACGGTTCAGCGAAGACGAGGCTAGATATTTCTTTCAGCAGCTGATATCTGGTGTTCATTACTGTCATGCTATGCAAATATGTCATAGAGATTTGAAGCTGGAAAATACCCTTTTAGATGGAAGCCCTGCGCCTCGCTTGAAAATTTGTGACTTTGGTTATTCCAAGTCATCTTTGCTTCATTCCCGACCCAAATCGACTGTTGGAACTCCGGCTTATATAGCACCGGAGGTTCTTTCTAGGAGGGAGTATGATGGCAAGTTGGCTGATGTGTGGTCGTGCGGTGTGACCCTGTATGTCATGCTGGTCGGAGCATATCCCTTTGAGGATCAAGATGATCCTAGAAATTTTAGGAAAACAATTCAGCGCATAATGGCTGTTCAATACAAAATCCCTGATTATGTTCACATATCTCAAGATTGCAAACACCTTCTATCTCGAATATTTGTTGCAAATCCATTAAAGAGAATCTCTCTCAGGGAAATCAAAAACCATCCATGGTTTTTAAAGAATCTTCCAAGGGAGCTAACTGAATCAGCTCAAGCGGCGTACTACCAGAGAGGCAATCCAAGTTTTTCTATTCAAAGTGTGGACGAGATAAATAAAATTGTGGGAGAGGCGAGAGAGCCTCCTCCGGTATCTAGGCCGGTCAAAGGCTTTGGCTGGGAAGGCGAGGAAGAAGAAGAAGAAGTGGAAGAAGAAGAGGTGGAGGAAGAGGAAGAGGAAGAAGATGAGTATGACAAAAGGGTGAAAGAGGTTCATGCAAGTGGAGAATTTCAAATCAGTTAA 1065 0.4357 MERYEVVKDLGVGNFGVARLLRNKETKELVAMKYIERGHKIDENVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARYFFQQLISGVHYCHAMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPRNFRKTIQRIMAVQYKIPDYVHISQDCKHLLSRIFVANPLKRISLREIKNHPWFLKNLPRELTESAQAAYYQRGNPSFSIQSVDEINKIVGEAREPPPVSRPVKGFGWEGEEEEEEVEEEEVEEEEEEEDEYDKRVKEVHASGEFQIS* 355
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0929 354 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Psa7g0929 354 Gene3D Transferase(Phosphotransferase) domain 1 80 268 - -
Psa7g0929 354 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2H 2 347 - -
Psa7g0929 354 SUPERFAMILY Protein kinase-like (PK-like) 2 288 IPR011009 -
Psa7g0929 354 Coils Coil 314 348 - -
Psa7g0929 354 MobiDBLite consensus disorder prediction 315 338 - -
Psa7g0929 354 PANTHER SERINE/THREONINE KINASE 2 347 - -
Psa7g0929 354 MobiDBLite consensus disorder prediction 303 354 - -
Psa7g0929 354 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g0929 354 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Psa7g0929 354 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Psa7g0929 354 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g0929 354 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g0929 354 CDD STKc_SnRK2 3 259 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Psa7g0929 Psa-Chr7 71504017 71507263 Dispersed/Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0929 3 263 CBL-interacting serine-threonine protein kinases AT2G26980 42.279 9.26e-68 217
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Psa7g0929 Pkinase 3.1e-71 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0929 K14498 - gmx:547968 652.129