Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0890 ATGGCTTTCTTTGACAAATCATCTCGCCACCCTCTTGTTCCTGGATTTCTTTACACATCAAATGCACTCTCCCATTTGGATACTTCTTCAATCAACCATGCACCATCATCATCACCACGACCACGTAGGAATAATACTCCTATGATGATCCCTTCACCCGTCGAGAGTAGTATCCCCATGTTTTCTCCTGCTTTCTACGCTGCATGCAGCGCCGGTGGCGTCTTCAGCTGTGGCCTCACCCACATGGCTGTGACTCCTCTTGATCTCGTCAAGTGCAACATGCAGATTGACCCTGCAAAGTATAAGAGCATTACATCAGGATTTGGAGTTTTGCTGAAGGAGCAAGGTGCTAGAGGTTTCTTCAAAGGCTGGGTGCCAACTTTGTTTGGTTATAGTGCTCAAGGAGCATGCAAGTTTGGATTTTATGAATTCTTCAAAAAGTATTACTCAGATCTTGCAGGAGTAGAGAATGCAGTCAAGTACAAAACTTTCATATATCTAGCTGGTTCGGCTTCGGCAGAAGTTATTGCTGATATTGCCCTTTGTCCTATGGAGGCTGTCAAGGTTCGGGTACAAACTCAGCCTGGATATGCTCGTGGTTTGTCCGACGGGTTGCCCAAGTTTATCAAGGCAGATGGTGTTTCCGGGTTGTATAGAGGACTTGTTCCTCTCTGGGGCCGTCAGATACCATACACTATGATGAAATTTGCTTCCTTTGAGACTATTGTGGAGATGATCTACAAATATGCCATTCCAACTCCGAAAGCGCAATGCAGCAAAAGTAAGCAGCTTGGAGTGAGTTTTGCAGCAGGATATGTTGCAGGTGTACTGTGTGCAATTGTCTCACACCCTGCTGATAATCTTGTTTCTTTTCTCAACAATGCCAAGGGAGCCACTGTTGGTGATGCAGTGAAGAAGATTGGAGTAGTTGGTCTTTTCACTCGCGGCCTTCCTCTTCGTATAGTTATGATTGGAACACTAACCGGAGCTCAGTGGGGTCTCTATGATTCTTTTAAAGTATTTGTAGGATTGCCAACTACGGGTGGAGCTGCTCCCGCTCCAGTACCTACACCTACGAATTAG 1083 0.4571 MAFFDKSSRHPLVPGFLYTSNALSHLDTSSINHAPSSSPRPRRNNTPMMIPSPVESSIPMFSPAFYAACSAGGVFSCGLTHMAVTPLDLVKCNMQIDPAKYKSITSGFGVLLKEQGARGFFKGWVPTLFGYSAQGACKFGFYEFFKKYYSDLAGVENAVKYKTFIYLAGSASAEVIADIALCPMEAVKVRVQTQPGYARGLSDGLPKFIKADGVSGLYRGLVPLWGRQIPYTMMKFASFETIVEMIYKYAIPTPKAQCSKSKQLGVSFAAGYVAGVLCAIVSHPADNLVSFLNNAKGATVGDAVKKIGVVGLFTRGLPLRIVMIGTLTGAQWGLYDSFKVFVGLPTTGGAAPAPVPTPTN* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0890 360 SUPERFAMILY Mitochondrial carrier 68 336 IPR023395 -
Psa7g0890 360 Gene3D Mitochondrial carrier domain 64 342 IPR023395 -
Psa7g0890 360 Pfam Mitochondrial carrier protein 163 249 IPR018108 -
Psa7g0890 360 Pfam Mitochondrial carrier protein 67 150 IPR018108 -
Psa7g0890 360 PANTHER PHOSPHATE CARRIER PROTEIN 1 355 - -
Psa7g0890 360 ProSiteProfiles Solute carrier (Solcar) repeat profile. 262 341 IPR018108 -
Psa7g0890 360 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 1 355 IPR044677 GO:0005315|GO:1990547
Psa7g0890 360 ProSiteProfiles Solute carrier (Solcar) repeat profile. 64 148 IPR018108 -
Psa7g0890 360 ProSiteProfiles Solute carrier (Solcar) repeat profile. 161 245 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0890 Psa-Chr7 67420376 67422973 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0890 6 360 Chloroplast and Mitochondria Gene Families AT5G14040 73.797 0.0 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0890 K15102 - gmx:100800530 576.244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g0890 7 67420376 67422973 Psa7g0890 7 67420376 67422973 ECH