Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0883 ATGGCAGCTTTTTCATATCAACTACCTTTTCTTGTTGACTCTTCATCTTACTTCACCAATATAAACAATTCTCTTGCTCCTCACACTCTTCAAGTTCATCAAGATAACTCTCTTAGTAATCAAGAAACTAGTTGTGTTGATGATCAAGCCTCTAAGAATAGTTTAAGTCCTGAATCCTCTATGGTGGTTGATAATCTTGAAAAGGGTGAGCAAGTTACTCAGAAAGTGAGTTCTATGGAGAATAAGAGAAGGATTAGAACAAACAAGTCTTCTTCAAGTAGCCCCTTATCTAAGGAGTCAAAAGAAGAGAGAAGCAAAAAACAAAAGAAGAATAGTGGTGAAGGGATGAAAAGAGAAGAGAAGAAGAATCAGAAGAAGTTTTCTGAAGAGGCTCCAACTGGCTATATCCATGTCAGAGCTAGAAGGGGCCAGGCAACAGATAGCCACAGCCTTGCTGAAAGGGTGAGAAGAGAGAAAATAAGTGAAAGGATGAAGATATTGCAGCAACTTGTGCCTGGCTGTGATAAAGTAACCGGAAAAGCTCTTGTGTTGGATGAAATAATCAATTATGTACAGTCCTTACAGAATCAAGTAGAGTACTTGTCAATGAAGATTGCATCAGTGAATCCAATCTTCTTTGACTTTGCAATGGACTTAGACATGGCTAGACCAGATCATGAGAGACTAAATGGCATAACATCACCATCACCATCATCAACACCACTACAATCTGTACCATTATGCAGCTCCAACCATGCCACACCTTTTGCTGACACAACCCTCACAAGCTTCCACCATGCTGCAGCTAATAATGAATATCTTTTGGATTATTCATCTCCAGTTTTTCATCAAGGACAGAGGTCAAATACCTTCTTTGAGCACACTGATGGGCCATATTGGGACTTAGAAGAACAACGACAAAAGCTTCTTAATCCATATGGATTCAGCAACAATACATGTTCCTTAAATTAA 972 0.3899 MAAFSYQLPFLVDSSSYFTNINNSLAPHTLQVHQDNSLSNQETSCVDDQASKNSLSPESSMVVDNLEKGEQVTQKVSSMENKRRIRTNKSSSSSPLSKESKEERSKKQKKNSGEGMKREEKKNQKKFSEEAPTGYIHVRARRGQATDSHSLAERVRREKISERMKILQQLVPGCDKVTGKALVLDEIINYVQSLQNQVEYLSMKIASVNPIFFDFAMDLDMARPDHERLNGITSPSPSSTPLQSVPLCSSNHATPFADTTLTSFHHAAANNEYLLDYSSPVFHQGQRSNTFFEHTDGPYWDLEEQRQKLLNPYGFSNNTCSLN* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0883 323 MobiDBLite consensus disorder prediction 34 76 - -
Psa7g0883 323 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 1 323 IPR024097 GO:0006355
Psa7g0883 323 Pfam Helix-loop-helix DNA-binding domain 148 195 IPR011598 GO:0046983
Psa7g0883 323 MobiDBLite consensus disorder prediction 34 136 - -
Psa7g0883 323 CDD bHLH_AtBPE_like 134 219 - -
Psa7g0883 323 Gene3D - 141 210 IPR036638 GO:0046983
Psa7g0883 323 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 142 209 IPR036638 GO:0046983
Psa7g0883 323 MobiDBLite consensus disorder prediction 96 128 - -
Psa7g0883 323 PANTHER BASIC HELIX LOOP HELIX PROTEIN BHLH8 1 323 - -
Psa7g0883 323 SMART finulus 150 200 IPR011598 GO:0046983
Psa7g0883 323 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 144 194 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0883 Psa-Chr7 66429878 66432725 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0883 104 242 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50915 61.224 9.81e-55 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Psa7g0883 HLH 4.3e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0883 - - gmx:100796018 328.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g0883 7 66429878 66432725 Psa7g0883 7 66429878 66432725 ECH