Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0879 ATGGAAAAGCTGAACTTTATTAAAAATGGAGTGAGTAGATTGCCTCCTGGTTTTCGTTTCCAACCGACGGATGAAGAACTTGTTTTTCAGTATTTGAAATGTAAAATCTTCTCATGCCCCTTGCCAGCTTCCATCATTCCTGAGGTCAATGTTTGCAAGTATGATCCTTGGGATTTGCCAGGAGGCTGTGATGAGCATGAGAGGCACTTTTTCAGCTCCAAGGAAGCAAAATATAGAAATAGTAATAGGATGAGTAGAACAACAAAATGTGGATATTGGAAGGCGACAGGATCAGACAAAAGAATTTCATCTTCAAGTTGTAATGGCATTGTTGGAATAAGAAAAACCCTAGTTTTTTATCAAGGAAAATCACCAAATGGTTGTAGAACTAATTGGATCTTGCATGAATATCGTCTCGTCAACGTAGAAACTAGTTCTTCAAATTCAACTCAGAATTATGGAAATGAAATTGGAGATTGGCTTCTATGTCGATTATCGACGAGGAAAAGAAATTTAGAATATGGAAGCACTAGTACTCATAATAATAATAATAATAACAATAACAATAATGCTACTCCGAATTCGAGATTAATGTTTGATTTTATGATGGTAAACAACAAGGCATGTTCTTCTACTTCATCTTCATGTTCAAGTTCAAGTAACAACAACATTGAGGTCTCTTCAAATCTACAAGATCATGAACAAGATTATGCTGAACATTTTTAA 726 0.3499 MEKLNFIKNGVSRLPPGFRFQPTDEELVFQYLKCKIFSCPLPASIIPEVNVCKYDPWDLPGGCDEHERHFFSSKEAKYRNSNRMSRTTKCGYWKATGSDKRISSSSCNGIVGIRKTLVFYQGKSPNGCRTNWILHEYRLVNVETSSSNSTQNYGNEIGDWLLCRLSTRKRNLEYGSTSTHNNNNNNNNNNATPNSRLMFDFMMVNNKACSSTSSSCSSSSNNNIEVSSNLQDHEQDYAEHF* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0879 241 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 241 - -
Psa7g0879 241 Gene3D NAC domain 23 174 IPR036093 GO:0003677|GO:0006355
Psa7g0879 241 SUPERFAMILY NAC domain 10 166 IPR036093 GO:0003677|GO:0006355
Psa7g0879 241 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 241 - -
Psa7g0879 241 Pfam No apical meristem (NAM) protein 15 139 IPR003441 GO:0003677|GO:0006355
Psa7g0879 241 ProSiteProfiles NAC domain profile. 14 168 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0879 Psa-Chr7 66029800 66031305 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0879 1 170 NAC Transcription Factor Family AT5G13180 61.176 4.06e-71 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Psa7g0879 NAM 8.8e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0879 - - gmx:100812015 345.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g0879 7 66029800 66031305 Psa7g0879 7 66029800 66031305 ECH