Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0868 ATGGACGATGACCGGCAATATGAAAACGGTAGACATAAGGTGGAATACTATAGAGGAGCACATTCCCCTTGGAACGTGGATCCCCAACATCAAATAAAGGAACAAAATGCCCTAGTTATGAATAAAAAAATCAGGTCCATTATGGCTGAGAGACAGGCTACCATTCTGGAAATTGAACTAGAGGCTGCTATATCTGAAAAGAATGAAGCCTTGGCTGCTCGAGACGTTGCCCTTAGGCAGAGGGATGAAGCGCTCGCCCAGAGGGATAATGCCCTGTTGGAACGGGATAATGCCCTTGCAGCCCTACAATGTCGGAATAGTTCTGCCAACTTTTCATTCAACGGTGGAAATCATCGCGGATCAAAGCGGATGCACCGGTCTTCAAACCATCATCTATCCAACATGACAGAAGCAGCATATAACTCCACAGATATAATCATAAGAGATGCCTCTCCAGTAACTGTTATAACATCAGAAGCCATCGAGTCTCATCTAACTAAGACAACAAAGGATAATTCCAAGGCATCAAAAGCACCTACAAAAGTAAAGAAAATGGGTGAGGATTTAAATAGGAAGGCTTATTCTGAAGGTACAAAGATCAAATCTGAATGGGACAGACAGGATGTTGGCTTGAATTTGATTACTTTCGATGAAACTGTCATGCCTGTCCCAGTTTGCACGTGTACCGGAGCACCACGACAGTGCTACAAATGGGGGAATGGTGGATGGCAATCCTCTTGTTGTACTACTACACTGTCAATGTATCCACTACCACAGCTTCCAAACAAGCGCCATGCTCGCATCGGAGGGCGGAAAATGAGCGGCAGTGTTTTTACAAGACTTCTCAGTAGGTTTGCATCAGAAGGCCATGATTTATCTATACCATTGGATCTTAAGGATTACTGGGCCAGACATGGAACAAATCGCTACATTACCATCAAGTAG 945 0.4423 MDDDRQYENGRHKVEYYRGAHSPWNVDPQHQIKEQNALVMNKKIRSIMAERQATILEIELEAAISEKNEALAARDVALRQRDEALAQRDNALLERDNALAALQCRNSSANFSFNGGNHRGSKRMHRSSNHHLSNMTEAAYNSTDIIIRDASPVTVITSEAIESHLTKTTKDNSKASKAPTKVKKMGEDLNRKAYSEGTKIKSEWDRQDVGLNLITFDETVMPVPVCTCTGAPRQCYKWGNGGWQSSCCTTTLSMYPLPQLPNKRHARIGGRKMSGSVFTRLLSRFASEGHDLSIPLDLKDYWARHGTNRYITIK* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0868 314 SMART GAGA_bind_2 1 314 IPR010409 -
Psa7g0868 314 PANTHER PROTEIN BASIC PENTACYSTEINE4 1 314 - -
Psa7g0868 314 PANTHER - 1 314 IPR010409 -
Psa7g0868 314 Pfam GAGA binding protein-like family 1 314 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0868 Psa-Chr7 63859277 63863481 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0868 1 314 BBR or BPC Transcription factor family AT2G21240 57.595 7.74e-128 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Psa7g0868 GAGA_bind 3.7e-98 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0868 - - gmx:100813103 526.554