Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0863 ATGTGCAACAAAAACACTATTACTGTTTCTCCAACCAAGACTAAATCTGTTGCCATGAAGAGAAAAAGGAAACCGACATATAAAAATTCATCTTCTTCTTTGTCATCTTCTTCTTCATCTTCTTCTCTTAAACCTCACAAACGCAGGAACAGAACGAAAACAAGAAAACCTAAGTATCTTAGTCTTCGTTTACAGCTCTCACAAACTCAAACAAACCAAACACAAAGGACAACGAAACAACAGCAGCACCAACAACAACAACCAGAATTGAATCTCTTCGCTCACCAATCAGATTCCGACATGCAAGAAGAAAACAACGTGGCTTTACTCTTCACATCCGACGGTGGAGCAACGTTAAACGGTCTTCTAGAAGACGAATCGACGACCCTAACGGCGACAACGGCGGAGGAGGAAGAGTCGTTATCGGTGATGAGGTGTCCGGCGATGGAAGGGTTGGTAAAGAAAGCGATGAGGAGGAAGAGAAACGACGAGGAAGAGAGATGGGTTAGTTATTCGGAAGTTGTGGAAGAGAAGAAGGAAATGATGGAGGAAGTGAATAGTTGTGTTGGGAGTGAAACGACGTCGTTTTTGGGGTCTTTGTCTTTGAAGCTGGATCATGATGGAATATTGAATGCTTGGTCTGATAAAGGATCTCTTTATGTTGATGCTGCTGATGAAGCCCCACAGACTGTTCCTGATTTGTTTAATGCTTCCACCATCCTTCCCAATGTAATGTGGGATGGTTATGGGTGTGATGTTGTTGGGAACACATGGAAGGTACCTGATGGTTGTGGAGCAAACAATAACAATGTGAATGTGAAGGAAGAAATGGGTTGGAAGGTTGGGCAGAGAGAGGCAAGTTTGTTGAGATACAAAGAAAAAAGGCAAAGCAGACTCTTTGCGAAGAGGATTCGTTACGAAGTTCGCAAGTTGAATGCTGAAAAACGGCCTAGAATGAAGGGACGATTTGTGAAGAGAGAATAA 984 0.4278 MCNKNTITVSPTKTKSVAMKRKRKPTYKNSSSSLSSSSSSSSLKPHKRRNRTKTRKPKYLSLRLQLSQTQTNQTQRTTKQQQHQQQQPELNLFAHQSDSDMQEENNVALLFTSDGGATLNGLLEDESTTLTATTAEEEESLSVMRCPAMEGLVKKAMRRKRNDEEERWVSYSEVVEEKKEMMEEVNSCVGSETTSFLGSLSLKLDHDGILNAWSDKGSLYVDAADEAPQTVPDLFNASTILPNVMWDGYGCDVVGNTWKVPDGCGANNNNVNVKEEMGWKVGQREASLLRYKEKRQSRLFAKRIRYEVRKLNAEKRPRMKGRFVKRE* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0863 327 MobiDBLite consensus disorder prediction 1 88 - -
Psa7g0863 327 MobiDBLite consensus disorder prediction 28 43 - -
Psa7g0863 327 ProSiteProfiles CCT domain profile. 284 326 IPR010402 GO:0005515
Psa7g0863 327 MobiDBLite consensus disorder prediction 1 15 - -
Psa7g0863 327 Pfam CCT motif 284 326 IPR010402 GO:0005515
Psa7g0863 327 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 40 327 - -
Psa7g0863 327 MobiDBLite consensus disorder prediction 61 88 - -
Psa7g0863 327 PANTHER CCT MOTIF FAMILY PROTEIN 40 327 - -
Psa7g0863 327 MobiDBLite consensus disorder prediction 44 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0863 Psa-Chr7 63533061 63536130 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0863 199 326 C2C2-CO-like Transcription Factor Family AT1G73870 43.077 8.65e-22 93.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Psa7g0863 CCT 4.2e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0863 - - gmx:100798231 306.605