Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0825 ATGTGGGGATGGATGATTAGGGAAGGCCGTAAGGCACCATCATCACCCTCATGGAACCTCAATCTCATCCGTAACATGGGCGGCGGTCCTCGCACCTTCCCCGGCGGCGTAACCAAATGGAAATGGAAACGCATGCACGAAAAACGAGCCAAAGAGAAACAAAGAAACCTTCTCGAACAAGAGAAACAACTCTACCAAGCTCGCATTCGATCTCACATTCGCTCCACTCTCTCACCTCCTTCCTCCTCTTCATCTTCTTCCACCACTCATAACCCTATCTCCCCTCAACAACACATCAAAGCCCTCGCCGATCGGTTCATGAAAGACGGTGCTCAAGATCTCTGGAACGACCACGACGGTCCCATAGCCCAGCCCCAGCCCCAAATTCAAGACCAAACCTCGCAGCAAATTGATTTACGCAAACTCGCACATCAATCTTCCAATCAGAATTGGACTCATTTGAATAATTATTCGCAAATTAGGGGTTACCGTTCTGTTCCTGAAGTTAGGGTTTTGGCTGATCGGAAGCGTGTTAGCACTGAAAAGCCTGAAAAACGTAAAATTTGGAGGAAGAATGGTTCTTCTACTGAGAGTGAAAGTGAGGCTGAAGATGAATCTCAGAATCAGAGTTACTATTCAAATATGGGTAGCATTGCTTCATTGGGTAAATATGATGGAAAGAGGGAGAGGAGAGTTATGCCAAAGACCTTTGACGACAAAACTGATTTTTCTGAGCAGGTTCAGTTGATCAAGTATGAGCTTAACAAGAAGAAGTTGAGTCAAGGTGAGGAAAATCAGGATCAGGAACAGGAAAATGTTCTTACTCAGACAAGATTTGAAGAGTGTGCTATATCACCATTGACAATCAAAGCACTTTCTTCATCTGGTTACATTCATATGACCCGGGTTCAAGAGACTAGCCTCCCCATTTGTCTTGAGGGTGTGGATGTTATGGTCAAGGCTAAAACTGGCACTGGAAAAACTGCAGCTTTTTTGCTTCCTGCTATTGAAACAGTTTTGAAAGCTATGAGTAGCAATACCTCTCACCGTGCACCGCCAATATCTGTTCTTATTCTATGCCCTACTAGAGAACTTGCTAGTCAAATTGCTGCTGAAGCAAAGGTTTTACTGAAATATCACGATGGCATTGGGGTGCAGACTCTAGTTGGAGGTGTGCGATTTAAAGTTGACCAGAAACGCCTTGAATCAGATCCATGCCAGATGCTTGTAGCTACACCTGGTAGGTTGCTGGATCATATTGAGAATAAATCCGGAATATCTGTTCGATTGATGGGTTTGCAGATGCTTGTACTTGATGAAGCTGATCATTTACTGGACCTTGGGTTTCGAAAGGATATAGAAAAAATTGTTGATTGTTTGCCTCGTCAAAGGCAATCCTTACTGTTTTCTGCAACCATCCCAAAGGAGGTCCGTCGAATATCTCAGCTTGTTTTGAAAAGAGAACACAAATATGTTGATACAGTTGGAATGGGTTGTGTGGAAACTCCCGTTCAGGTAAAGCAATCATATCTTATTGCTCCACATGAATCACACTTTCAGATAGTACATCATATTTTGAAAGAGCATGTCTCGCAAACACCTGATTATAAGGTTATTGTTTTCTGTATTACTGGGATGGTGACATCACTCACGTATAACCTGCTTCGGGAAATGAAACTGAATGTTAGGGAGATACATTCTCGAAAACCTCAGCTGTATCGGACTCGCGTATCAGAAGAGTTTAAGGAATCCAAACAAATGATTCTTGTGTCCTCTGATGTTTCATCACGTGGAATGAATTATCCTGATGTCACTTTAGTCATTCAGGTGGGAATTCCTACAGACCGTGAACAATATATACATCGTCTTGGAAGAACAGGACGGGAAGGCAAAGGAGGGGAAGGCATATTGTTGATTGCACCATGGGAGGAGTATTTTTTAAATGAGATCAAGGATCTCCCTCTAGAGAAATTCCCCTTACCAGATTTAGATCCACAGGCACAACTTAAGATTGAACAATCAATGGCAAAGATTGATAATGACATCAAAGACGCAGCTTATCATGCTTGGCTCGGTTATTATAACTCCATCAGAGAAATTGGGAGGGAGAAGAGCACAGTAGCTGAGCTGGCAAACCGGTTTTCTGAATCAATTGGTTTACAGAGGCCACCTTCTCTGTTTCGAAAAACTGCACTAAAGATGGGTTTGAAAGACATTCCTGGTATTAGAATTCGTAGATAG 2241 0.4284 MWGWMIREGRKAPSSPSWNLNLIRNMGGGPRTFPGGVTKWKWKRMHEKRAKEKQRNLLEQEKQLYQARIRSHIRSTLSPPSSSSSSSTTHNPISPQQHIKALADRFMKDGAQDLWNDHDGPIAQPQPQIQDQTSQQIDLRKLAHQSSNQNWTHLNNYSQIRGYRSVPEVRVLADRKRVSTEKPEKRKIWRKNGSSTESESEAEDESQNQSYYSNMGSIASLGKYDGKRERRVMPKTFDDKTDFSEQVQLIKYELNKKKLSQGEENQDQEQENVLTQTRFEECAISPLTIKALSSSGYIHMTRVQETSLPICLEGVDVMVKAKTGTGKTAAFLLPAIETVLKAMSSNTSHRAPPISVLILCPTRELASQIAAEAKVLLKYHDGIGVQTLVGGVRFKVDQKRLESDPCQMLVATPGRLLDHIENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQRQSLLFSATIPKEVRRISQLVLKREHKYVDTVGMGCVETPVQVKQSYLIAPHESHFQIVHHILKEHVSQTPDYKVIVFCITGMVTSLTYNLLREMKLNVREIHSRKPQLYRTRVSEEFKESKQMILVSSDVSSRGMNYPDVTLVIQVGIPTDREQYIHRLGRTGREGKGGEGILLIAPWEEYFLNEIKDLPLEKFPLPDLDPQAQLKIEQSMAKIDNDIKDAAYHAWLGYYNSIREIGREKSTVAELANRFSESIGLQRPPSLFRKTALKMGLKDIPGIRIRR* 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0825 746 Pfam DEAD/DEAH box helicase 301 479 IPR011545 GO:0003676|GO:0005524
Psa7g0825 746 MobiDBLite consensus disorder prediction 74 96 - -
Psa7g0825 746 PANTHER RNA HELICASE 29 122 - -
Psa7g0825 746 PANTHER RNA HELICASE 243 745 - -
Psa7g0825 746 MobiDBLite consensus disorder prediction 175 198 - -
Psa7g0825 746 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 354 648 IPR027417 -
Psa7g0825 746 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 33-RELATED 243 745 - -
Psa7g0825 746 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 33-RELATED 29 122 - -
Psa7g0825 746 SMART helicmild6 549 630 IPR001650 -
Psa7g0825 746 Coils Coil 43 70 - -
Psa7g0825 746 CDD SF2_C_DEAD 506 639 - -
Psa7g0825 746 Gene3D - 501 726 IPR027417 -
Psa7g0825 746 Gene3D - 241 492 IPR027417 -
Psa7g0825 746 MobiDBLite consensus disorder prediction 175 214 - -
Psa7g0825 746 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 308 491 IPR014001 -
Psa7g0825 746 SMART ultradead3 296 507 IPR014001 -
Psa7g0825 746 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 277 305 IPR014014 GO:0003724
Psa7g0825 746 Pfam Helicase conserved C-terminal domain 525 629 IPR001650 -
Psa7g0825 746 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 525 666 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0825 Psa-Chr7 59728310 59732364 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0825 277 655 Eukaryotic Initiation Factors Gene Family AT3G19760 26.835 3.62e-40 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0825 - - lang:109349967 1069.68