Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0792 ATGAAGTTGAGTACTTTATTTTTGCTTATGGGTTTGGTTTCTATGTTCTCTTCTGTGTCTTCTGCTATGGTGGCATCAAATGAAGTTTGGGCGCTTAAAACCTTCAAAGAAGCTGTGTATGAAGATCCACATAAGGTTTTGTCCAATTGGAATACTTTGGATTCAGATCCTTGTGATTGGAATGGAGTTTCATGCACCGGAATTCGAGATCATGTCATCAAACTAAACATGTCAGGGGCATTACTAAGAGGGTTTCTTGCGCCAGAAATCGGGAAAATAACCTACTTGCAAGAATTGATCTTGCATGGTAACAATCTCATTGGAATAATACCTAAAGAATTGAACGCGTTGAAATCTCTCAAGGTGTTGGATTTGGGAAAGAACCAGTTATCAGGACCAATTCCTCGTGAGATTGGAAATTTGACCGAAATCGTGAAAATAAATCTGCAGTCCAATGGTTTGACTGGTAGGTTACCTCCGGAGCTTGCGAATTTGAAATACCTTCAAGAACTTCGCCTTGATAGAAATAAGCTTGAAGGGCCTGTTCCTGCTGCTAGCACTTCAAATTTTTCTTCGAATATGCATGAAATGTATGCATCAAATGCGAATTCTACTGGCTTCTGCCGTTCGTCGCTTAAAGTTGCTGATTTTTCATATAACTTTTTGGTCGGTAGCATACCGAAATGTTTGGAGTATCTTCCGAGAACAAGCTTTCAAGGGAATTGCCTCCATGTCAAAGACGTAAAACAGCGGACGAAAGTTCAATGTGCTGGAGCTTCACCTGCTCAAGGCCATCCAGTAGTGAAACCAAAGCACCAATCGAAAGCCGAACACGTATCAAAGCATCAAGGAGCTTCGAAACCTGCCTGGCTTTTGGCTATAGAAATAGCGACCGGGACCATGGTTGGTTCTCTCCTTTTGATTGGAATTTTCACTGCTGTCCAAAGATGTAACAAAAAAGCATCCATCATTATTCCTTGGAAGAAATCCGCAAGCGAGAAAGAGCAAATCGCAGTATATATAGACTCAGACATGTTGAAAGATGTCAGGAGGTATAACAGACAAGAGCTTGAGGTGGCTTGTGAAGATTTCAGCAACATAATCGGATCCTCACCGGATAGTGTGGTCTACAAAGGAACAATGAAAGGCGGACCTGAGATTGCTGCGATTTCTTTATGCATCAAAGAAGAGAATTGGACCGGACACCTTGAACTTTATTTTCAGAGAGAGGTGGCAGACTTGGCAAGGTTAAACCACGAAAACACGGGAAAATTACTAGGATATTGTAGAGAAAACGCTCCATTTACAAGAATGCTGGTTTTTGATTATGCATCAAATGGAACACTTTATGAACACCTACATTGTTATGAAGAAGGGTTCCAGTTATCTTGGACACGACGTATGAAAATCATCATCGGCATCGCACGTGGACTAAAGTATTTGCACACAGAAATTGATCCTCCATTCACTATCTCAGAGTTGAATTCGAGCGCAGTATACCTCACAGAAGACTTTTCCCCCAAGCTGGTTGATTTTGAAAGTTGGAACACGATTCTCGAAAGATCAGAGAAAAACTCCGGTTCTGTTAGCAGCCAAGGTGCTGTTTGTCATCTTCCTAACTCCCTTCGAGCGCGTTACCTTGATACCAAAGGAAACATTTATGCTTTTGCAGTACTTGTTCTCGAGATCATCAGTGGGAGATCTCCATATTGCCAGGACCGAGGATACTTGGTAGATTGGGCGAGAGATTATCTTGAAATGCCGGAAGTAATGTCATACTTGGTCGATTCCGAGTTGAAGCATTTCGGATACGACGATCTGAAAGTAATATGTGAGGTGATAACTCTTTGTATTAGTCCTGACCCTAATGTATGTCCATCAATGCAAGAACTATGCAGCATGCTGGAAAGCCGAATCGACACATCAATAAGTGTGGAGCTCAAATCTTTAGCTTGGGCTGAGCTAGCACTTTCAACATAA 1980 0.4177 MKLSTLFLLMGLVSMFSSVSSAMVASNEVWALKTFKEAVYEDPHKVLSNWNTLDSDPCDWNGVSCTGIRDHVIKLNMSGALLRGFLAPEIGKITYLQELILHGNNLIGIIPKELNALKSLKVLDLGKNQLSGPIPREIGNLTEIVKINLQSNGLTGRLPPELANLKYLQELRLDRNKLEGPVPAASTSNFSSNMHEMYASNANSTGFCRSSLKVADFSYNFLVGSIPKCLEYLPRTSFQGNCLHVKDVKQRTKVQCAGASPAQGHPVVKPKHQSKAEHVSKHQGASKPAWLLAIEIATGTMVGSLLLIGIFTAVQRCNKKASIIIPWKKSASEKEQIAVYIDSDMLKDVRRYNRQELEVACEDFSNIIGSSPDSVVYKGTMKGGPEIAAISLCIKEENWTGHLELYFQREVADLARLNHENTGKLLGYCRENAPFTRMLVFDYASNGTLYEHLHCYEEGFQLSWTRRMKIIIGIARGLKYLHTEIDPPFTISELNSSAVYLTEDFSPKLVDFESWNTILERSEKNSGSVSSQGAVCHLPNSLRARYLDTKGNIYAFAVLVLEIISGRSPYCQDRGYLVDWARDYLEMPEVMSYLVDSELKHFGYDDLKVICEVITLCISPDPNVCPSMQELCSMLESRIDTSISVELKSLAWAELALST* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0792 659 PANTHER PROTEIN MALE DISCOVERER 2 6 658 - -
Psa7g0792 659 Gene3D Transferase(Phosphotransferase) domain 1 444 649 - -
Psa7g0792 659 Gene3D Phosphorylase Kinase; domain 1 334 443 - -
Psa7g0792 659 ProSiteProfiles Protein kinase domain profile. 362 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g0792 659 Pfam Leucine rich repeat 95 154 IPR001611 GO:0005515
Psa7g0792 659 SUPERFAMILY Protein kinase-like (PK-like) 346 636 IPR011009 -
Psa7g0792 659 SUPERFAMILY L domain-like 27 234 - -
Psa7g0792 659 Pfam Leucine rich repeat N-terminal domain 27 65 IPR013210 -
Psa7g0792 659 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 6 658 - -
Psa7g0792 659 Gene3D Ribonuclease Inhibitor 25 253 IPR032675 -
Psa7g0792 659 Pfam Protein tyrosine and serine/threonine kinase 365 634 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0792 Psa-Chr7 57590987 57594471 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0792 41 640 Receptor kinase-like Gene Family AT5G45780 28.268 1.08e-55 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Psa7g0792 PK_Tyr_Ser-Thr 2.6e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0792 - - gmx:100779744 1074.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g0792 7 57590987 57594471 Psa7g0792 7 57590987 57594471 ECH