Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0778 ATGGGCTCCGATAGAGCATCCGTTGCTCTAGCTCAAGCTTTCAAGACTGCTCAAAGATACTCGCCAACAATACTTATTCTTCGTCATTTTGAGGCATTTCGAGATTCGCATTCCCCTGAGATTTCACCAAATGATCAAAGAGGCAATACATCTGAAGTTGCATCCGTTATTAGGAAATTCACCGAGTCAGTTGGTGAACATGATGATAGTAACTCTCTGATGAAATCAAATGGCGAATTTGTGGAGAAGAATGTTGAAAAGACAAGTGGGCATCAGGTCCTGTTGATTGCTGCAGCTGATAGTTCAGAGGGTCTACCTTCAACCATCAGACGCTACTTTAGCCATGAAACGAAAATGAGGCCTTTGACAGAAGAGCAAAGGGCTGAGATGCTATTGCATTCACTAGAGAATATTTATGGACTCCATTCTAATACTGATTTAGAGGATGCTGGTGCCAACTTATTTCCCAGCAGCAATGTTGAAGTAGACAAAGTTGAACCCGAAGGTGCAGATAGTTCTCTTAGTTCAAAGGTGACAGAGGACAACAACGAGTCAGAAGTTTCAGCTCTAAAATCTAGGAAAGAAGACTTGGTGAATGCTTTGGAACGATCAAAGAAAAGAAATGCGTCAGCATTGGGCACTCAAAGTGTGAAGGGTCCTGAATTGATCAACATGTACATAGGCGAGTCTGAGAAGAATGTTCGAGACATTTTTCAGAAGGCCCGATCATCCCGTCCATGTGTCATCTTCTTTGATGAGCTGGACTCTCTTGCACCTGCTCGGGGAGCTTCCGGTGATTCTGGGGGTGTTATGGACAGAGTGGTTTCACAGATGCTTGCAGAAATTGACGGCTTAAGTGATTCAACACATGATCTATTTATTATAGGTGCAAGTAATAGACCATATTTGATAGACCCAACACTTCTTCGCCCTGGTCGTTTTGATCAATTGCTATATGTTGGCGTTAACTCTGATGCATCTTACAGAGAGCGGATCCATCAATCGCTCGTTATGATCCTAAAACAAACTACCCCTCCCTTAGGCCACAATTCCTTCATTACAGACCAAAACCACAAATTAGAAGACAGATTCATCATGTTTGCAAGCTTTTCAGATTCAGAAGTTACCGAGGATAGTCAGTCTAAAGAATCGCTGAAGGAATCTGAGGATGCTTCTTCAAATGAAACGGTGAAGCAAGAAGAGGATCAAATTTCAAAACCAAGTCCTGTAAGGACTCTGTTGCCAGAGAAAACCGTTGAAGCAAAGGGCTTGCCTAAGTCACGGTTCTCCTTAAGGTCAAAGGTTATTGCTCTAATTTCGCTGTTGTCAGTTGCTTTTGCATCAATCTCAGTCACAAATTCTCTAGAGATTTATCATGTTGTATTTGGAGAATTTTATGAGGCTTATAAATTGTCTGAAATTTCAGAATTTGCAAGGGCTAACTTTGACCAATTCTCCCAGTTTTCAAAAGCAAATTATGACAAGTTTGGCATTGTTGAGGGTCACATAACCCTTTCCCATTCCATCACCGCCACCCACAAGACTGTTGATGGACCATCAAACAGGGACTGA 1572 0.4205 MGSDRASVALAQAFKTAQRYSPTILILRHFEAFRDSHSPEISPNDQRGNTSEVASVIRKFTESVGEHDDSNSLMKSNGEFVEKNVEKTSGHQVLLIAAADSSEGLPSTIRRYFSHETKMRPLTEEQRAEMLLHSLENIYGLHSNTDLEDAGANLFPSSNVEVDKVEPEGADSSLSSKVTEDNNESEVSALKSRKEDLVNALERSKKRNASALGTQSVKGPELINMYIGESEKNVRDIFQKARSSRPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLSDSTHDLFIIGASNRPYLIDPTLLRPGRFDQLLYVGVNSDASYRERIHQSLVMILKQTTPPLGHNSFITDQNHKLEDRFIMFASFSDSEVTEDSQSKESLKESEDASSNETVKQEEDQISKPSPVRTLLPEKTVEAKGLPKSRFSLRSKVIALISLLSVAFASISVTNSLEIYHVVFGEFYEAYKLSEISEFARANFDQFSQFSKANYDKFGIVEGHITLSHSITATHKTVDGPSNRD* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0778 523 Gene3D - 323 337 - -
Psa7g0778 523 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 213 332 IPR027417 -
Psa7g0778 523 Pfam ATPase family associated with various cellular activities (AAA) 216 321 IPR003959 GO:0005524|GO:0016887
Psa7g0778 523 MobiDBLite consensus disorder prediction 375 411 - -
Psa7g0778 523 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 490 521 - -
Psa7g0778 523 Gene3D - 3 141 IPR027417 -
Psa7g0778 523 Coils Coil 187 207 - -
Psa7g0778 523 Gene3D - 214 322 IPR027417 -
Psa7g0778 523 PANTHER PEROXISOME ASSEMBLY FACTOR 2 216 337 - -
Psa7g0778 523 PANTHER PEROXISOME ASSEMBLY FACTOR 2 6 214 - -
Psa7g0778 523 MobiDBLite consensus disorder prediction 376 405 - -
Psa7g0778 523 PANTHER AAA-FAMILY ATPASE 216 337 - -
Psa7g0778 523 PANTHER AAA-FAMILY ATPASE 6 214 - -
Psa7g0778 523 MobiDBLite consensus disorder prediction 165 191 - -
Psa7g0778 523 CDD AAA 216 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0778 Psa-Chr7 56855601 56859193 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0778 216 333 Calmodulin-binding Proteins AT3G56690 41.525 3.39e-22 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0778 K13339 - qsu:112003596 378.252