Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0752 ATGGTGCCGCAAAACATGAAGGAACATCTTGCTTTGGCGGTTAGAAGCATCCAATGGAGCTATGTAATCTTCTGGTCTGAATATGTTAACCAACCAGGGGTGTTGGGTTGGGGGGAAGGATATTACAATGGAGACATTAAGACAAGGAAAACAAATCAAGGAGTGGAGCTTAGTTCCGACGAAATCGGCTTACAGAGAAGTGAGCAACTGAGAGAGCTGTTTAGGACTCTGAAACCTGTTGAAACGAGTCCTCAAACAAAAAGGCCTACTGCAGCACTTTCACCAGAAGATCTCACAGATACTGAGTGGTATTATTTGGTTTGCATGTCCTTTGTATTCAAGATTGGCCAAGGGTTACCAGGAAGAGCTCTAGCAAATGGCCAACCAATTTGGCTGATCAATGCTTATTCTACTGATTGCAAAGTGTTTAGTCGCGCTCTGCTCGCAAAGAGTGCATCTATTCAGACAGTGGTGTGTTTTCCTTTTATGAAAGGGGTTATTGAGCTAGGTACAACTGATCTGGTATTGGAAGATCTCAGTCTCATTCAACAGATCAAAACTTTGTTGAATATTCTAAGTGTCGATGAGCCTATTAACGTTCGAGCTACATTGAATTCGAGAAATACCAAAGATGTTGCTTGTGTCGCAGCATTTGATCATAATGACTATAATGTTGAATTAATTCCGGAAGTTGGATATGACATAATCAATAGAACAACCTCTCCTAGTGGTAGTTCAAATGCATTACAAACCAATCAACTACGAGATGAAACATTCATGGTCGAAAGCTGGCGCGTTATGGAAGATGATTTGAGCAACTGTGTCCATAACTCCATGAATTCAAGTGACTGCATATCACAAACTATTGCTTCTGCTCCTAAGGGTAGAGAAGAAGATTGCAACAATGACCAAAAAATGACCTTAGTAGATCCCTTAAGTGAGGATTGGCACTATCAGAAAATTCTTGCAGCGCTTTTGAAAAGCAATGACCAGTTAACAATGGGGATGCATTTTCAAAACTTTCATCAGGAATCAAGCTTTTGTGTTTGGAACAAAGGAGGGCCATTGGATTGCCATAGGCCAAGACAAGGAACGTCGCAAAAGTTATTGAAGAAGATCTTGTTCGAAGTTCCGCGGATGCACATGGATGGTTTGGTTGAATCTCAAGAAGAGAATGACTATAGAGAGGGAACAAGACTTGAGACTGAAGAAGGTATGAACCATGTTTTGTCAGAAAGAAGGAGAAGAGCAAAACTAAATGAAAGGTTTTTAACCCTTAGATCAATGGTCCCTTCAAATAGTAAGGATGACAAAGTTTCTATACTAGATGATGCAATTGAATACCTTAGAAAGCTTGAGAAAAGGATAAAAGAAATGCAAGGCCAAAGAGAGCCAACTGATATAGAGTCTAGAAGTAAAAGAACACATCATGATATGATGGAGAGGACTTCTGATCATTATTATAACAACAAAACAAACAATGGCAAGAAACCAATGGTGAAGAAGAGGAAAATATGCGACATAGACGAGACGAGGAGAGTGATTTACTCAGATGCTTTGAACGGAAGTTCTACTAGTGATGTTAGTGTCAAAATGAGTGACAATGGAGCTGTGATTGAAATCAAGTGCCCCTGTAGATCAGGAAGGATATTGGAAATTATGGAAGCAGTTAACAATCTCAACATAGATTTTAATTCAGTTCAATCAACAGAAGCTGATGGGAGTCTTCATCTGATCATAAAATCTAAGTTTACAGGATCAACTAATGCAACAGCAAAAAGGATCAAACAAGCCCTTCAAAAAGTGGCTTCAAAGTTTTAA 1821 0.3937 MVPQNMKEHLALAVRSIQWSYVIFWSEYVNQPGVLGWGEGYYNGDIKTRKTNQGVELSSDEIGLQRSEQLRELFRTLKPVETSPQTKRPTAALSPEDLTDTEWYYLVCMSFVFKIGQGLPGRALANGQPIWLINAYSTDCKVFSRALLAKSASIQTVVCFPFMKGVIELGTTDLVLEDLSLIQQIKTLLNILSVDEPINVRATLNSRNTKDVACVAAFDHNDYNVELIPEVGYDIINRTTSPSGSSNALQTNQLRDETFMVESWRVMEDDLSNCVHNSMNSSDCISQTIASAPKGREEDCNNDQKMTLVDPLSEDWHYQKILAALLKSNDQLTMGMHFQNFHQESSFCVWNKGGPLDCHRPRQGTSQKLLKKILFEVPRMHMDGLVESQEENDYREGTRLETEEGMNHVLSERRRRAKLNERFLTLRSMVPSNSKDDKVSILDDAIEYLRKLEKRIKEMQGQREPTDIESRSKRTHHDMMERTSDHYYNNKTNNGKKPMVKKRKICDIDETRRVIYSDALNGSSTSDVSVKMSDNGAVIEIKCPCRSGRILEIMEAVNNLNIDFNSVQSTEADGSLHLIIKSKFTGSTNATAKRIKQALQKVASKF* 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0752 606 Gene3D - 401 464 IPR036638 GO:0046983
Psa7g0752 606 PANTHER TRANSCRIPTION FACTOR TT8 3 602 - -
Psa7g0752 606 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 406 468 IPR036638 GO:0046983
Psa7g0752 606 Coils Coil 442 462 - -
Psa7g0752 606 PANTHER TRANSCRIPTION FACTOR EGL1 3 602 - -
Psa7g0752 606 SMART finulus 409 458 IPR011598 GO:0046983
Psa7g0752 606 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 403 452 IPR011598 GO:0046983
Psa7g0752 606 Pfam Helix-loop-helix DNA-binding domain 407 453 IPR011598 GO:0046983
Psa7g0752 606 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 7 188 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0752 Psa-Chr7 55952841 55956114 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0752 2 603 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G41315 43.531 2.18e-165 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Psa7g0752 bHLH-MYC_N 5.5e-49 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0752 - - gmx:100808167 833.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g0752 7 55952841 55956114 Psa7g0752 7 55952841 55956114 ECH