Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0741 ATGGATGGGAGAGAGGCTATGGCATTCTCTGGTGGTCCTGGTTCATATTACTTGCATAGAGGAGGGGTTGAGGCTGCAGGGTCTGGCTCTGGTGGGTTCCAAGTACCTCCTGGATTCAGAGCTTTGCCAAACAATGGTATCATAGCTCAGCCAAATGTGAGGGCTCAGGGTGGTAATGGTGACACTAGTTCCATGTTTTCGTTGGAGCCTCAGTCTCATGCTGATTTTAATCATGACATTAGCGTTGGTGCATCCTCCGGGGCACCTTCGAGTGAGCCTGTGAAAAAGAAAAGAGGGAGACCCCGGAAATACGGACCCGATGGATCAGTTTCTTTGAAACTGACTCCAATGTCTGCCCCGGCTAATTCCACTCAAGACTCGGGTACACCTTCCGAGAAGCGTGGTAGAGGACGTCCCCGGGGATCTGGAAGGAAGCAGCAGCTAGCTGCATTAGGTGATTGGATGACCAGTTCAGCAGGGTTGGCTTTTTCGCCTCACGTTATCACCATTGCAGCTGGCGAGGACATTGCAGCAAAACTATTGTTGTTGTCACAGCAGAGACCAAGGGCTCTGTGCATCTTGTCAGGCACTGGGATAGCTTCTAAAGTTACTCTGCGACAGCCTGCTTCTACCAATGCCGGTGTAACTTATGAGGGAAAATTCCAAATATTAAGCTTATCCGGTTCTTACTTGGTATCTGAAGATGGTGGACCAACCAACAGAACGGGTGGCATAAGTGTTTCTCTTTCTAGCCGCGATGGTCATGTTATTGGTGGCAGTGTTGCTATGCTTATTGCTGGAAGCCCAATACAGTTGGTTGTGTGCAGTTTTGTATATGGCGGTGGCTCGAAGGTAAAGACCAAGCAAGGAATGATTACCAATGGAGAAAGTTCCGAGCCTCATAATGATAACCTAGGTTCTCCAGCCAGTGCTCCACCTGATCAAAACTACATCTCTTCACCAACAGGTATGTGGCCGGGATCACAACCATCGGACATGAAAAGCGCGCCCGCACATACCGGCATTGACTTGACGCGAGGGTGA 1044 0.4971 MDGREAMAFSGGPGSYYLHRGGVEAAGSGSGGFQVPPGFRALPNNGIIAQPNVRAQGGNGDTSSMFSLEPQSHADFNHDISVGASSGAPSSEPVKKKRGRPRKYGPDGSVSLKLTPMSAPANSTQDSGTPSEKRGRGRPRGSGRKQQLAALGDWMTSSAGLAFSPHVITIAAGEDIAAKLLLLSQQRPRALCILSGTGIASKVTLRQPASTNAGVTYEGKFQILSLSGSYLVSEDGGPTNRTGGISVSLSSRDGHVIGGSVAMLIAGSPIQLVVCSFVYGGGSKVKTKQGMITNGESSEPHNDNLGSPASAPPDQNYISSPTGMWPGSQPSDMKSAPAHTGIDLTRG* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0741 347 ProSiteProfiles PPC domain profile profile. 157 299 IPR005175 -
Psa7g0741 347 MobiDBLite consensus disorder prediction 290 347 - -
Psa7g0741 347 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 1 347 - -
Psa7g0741 347 MobiDBLite consensus disorder prediction 77 148 - -
Psa7g0741 347 SUPERFAMILY AF0104/ALDC/Ptd012-like 163 279 - -
Psa7g0741 347 MobiDBLite consensus disorder prediction 290 335 - -
Psa7g0741 347 CDD DUF296 165 277 IPR005175 -
Psa7g0741 347 Gene3D - 165 291 - -
Psa7g0741 347 Pfam Plants and Prokaryotes Conserved (PCC) domain 165 278 IPR005175 -
Psa7g0741 347 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 347 IPR039605 GO:0003680
Psa7g0741 347 MobiDBLite consensus disorder prediction 115 130 - -
Psa7g0741 347 MobiDBLite consensus disorder prediction 50 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0741 Psa-Chr7 55648572 55651842 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0741 1 347 AT-hook Motif Nuclear Localized (AHL) Family AT1G63470 46.753 3.16e-90 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0741 - - gmx:100813888 451.055