Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0714 ATGGGTTTTCCCGTCGGATACACAGAACTTCTCTTCCCAAAACTCGTCCTTCACCTTCTCTCCATCTTCACCTTCATCCGAAAACTCATTTCCGTCATTTTCACCCATCTGGGTCTCCCCGATTTCATCGAACCCGACATTCCATGGCCCGAGAACTCAACCCGAATACCCGAATTCGAATCCGTTTCAGCTCTTCTCATCCGCGAAATCCTACCGGTTGTCAAGTTCAACGAGCTAGTGGACCCACCTGAAAGCTGCGCCGTTTGTCTCACGGAGTTCGAGGAAAACGATGAGATCAGACGGTTAGCGAATTGCAGACACATTTTCCATCGAGGTTGTTTGGACCGTTGGATGGGATACGATCAGAGAACGTGTCCTTTGTGTAGAACATCGTTCATACCGGATGATATGCAAAGTGCTTTCAATGAAAGACTTTGGGCGGCTTCTGGGATCCCTGAATTTCACTCTGATGTTTCTGTTTTGTAG 486 0.4794 MGFPVGYTELLFPKLVLHLLSIFTFIRKLISVIFTHLGLPDFIEPDIPWPENSTRIPEFESVSALLIREILPVVKFNELVDPPESCAVCLTEFEENDEIRRLANCRHIFHRGCLDRWMGYDQRTCPLCRTSFIPDDMQSAFNERLWAASGIPEFHSDVSVL* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0714 161 SMART ring_2 86 128 IPR001841 -
Psa7g0714 161 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 68 136 IPR013083 -
Psa7g0714 161 PANTHER BRH1 RING FINGER PROTEIN 1 158 - -
Psa7g0714 161 Pfam Ring finger domain 85 129 IPR001841 -
Psa7g0714 161 PANTHER RING ZINC FINGER PROTEIN-RELATED 1 158 - -
Psa7g0714 161 SUPERFAMILY RING/U-box 66 135 - -
Psa7g0714 161 CDD RING-H2 86 129 - -
Psa7g0714 161 SMART ringv_2 85 129 IPR011016 GO:0008270
Psa7g0714 161 ProSiteProfiles Zinc finger RING-type profile. 86 129 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0714 Psa-Chr7 50423479 50425350 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0714 1 150 C3H Transcription Factor Family AT1G63840 58.710 4.68e-60 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0714 K16281 - rcu:8287413 269.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g0714 7 50423479 50425350 Psa7g0714 7 50423479 50425350 ECH