Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0713 ATGGCTAGACAACTTTGTGAAGATGAAAAAACATCAAGTGGTGGATTTTGTTATAACCCACAAATCCAAGGTTTTGTGTCGGATCCAGAGATGTTCAATCTCACAACAGGCATGGAGATGATAGGGTTTTCAAAACATCTTCATCAACAACAACAACAACAACATAGTACTGACACAAACATGTGGAAAACAAATTTCTCAGGAGGAAAACTAAGTCAACAACATGTTGGTCCTTCACCTTCCTATCATCCTCAACAACATCATCATCATCATCATCAAGATTTCACTGTTTCTGAAACAACTAGTAATGATCATCAAAACCTAAACATGCTTCATCACCATCATCAACATCATCATCAAGATTCATCATCTTCTTCACAGTGGCAACAAGTTGATGATTCATCACTAAGATGTGTTTTCCCTTACGAAGGTAACGAAAGACCAAGTCAAGGACTTTCACTCTCTCTTAGTTCAACAAACCCTTCTTCTTTAGTTCTACAATCTTTTGAACTAAGAAACACTCATCAAATCCAAGATCAAGGGTATCAAGGTCATTTCCTTCTCAAAAACTCTAAGTTCTTGCTACCTGCTCAACAACTTCTCAACGAGTTTTGTAGTTTAGAAACCACAAAACAAAATGATCTAGTTTCACAAAAACAAAAATCTCAAAAATTCAACAACAAACAAAATTTTGAACAAGAACATGTTCACAATGGTAGCACTAGTTCCTCAATCAAACATTCCTTAACCTCCGTCGAGTTCGTCGAACTCCAGAAGAGAAAAACCAAGCTACTCTCCATGCTCGAAGAGGTGGATAGAAGGTACAAGAACTATTGTAACCAAATGAAGAGTGTGGTATCAACATTTGAAGGAGTAGCTGGAAATGGAGCTGCAAAAGTTTATTCAGCATTAGCATTAAAAGCCATGTCAAGACATTTTAGGTCTTTAAAAGATGGAATAATGGAACAAATTGAAAGAACAAGAAAAGCAATGGGAGAAAAAGACCCTATTGCACCTGGAACAACAAAGGGTGAAACACCTAGGCTCAAAATTCTCGACAGAGTCTTAAGACAACAAAGAGCATTCCAACAAATCAACATCATGGAAACTCATCCATGGAGACCTCAACGAGGTCTCCCTGAACGATCCGTCTCCGTTCTTCGAGCGTGGCTCTTCGAACACTTTCTCCATCCGTATCCAAGTGACGTTGATAAACATATTTTGGCCCGCCAAACCGGTCTCTCAAGAAGCCAGGTATCAAATTGGTTTATTAATGCAAGAGTGAGACTATGGAAGCCAATGGTGGAAGAAATGTATTTAGAAGAAGAGAAAGAGCAGCAAAGGAACACGACAACCTCGGAGGGAGGAAACAACATTAACCATGAAGAGGAAAATCTTAATGTCCTTCAAGATCAATCTCCGACACAACAACCTCATGAGGATCAAAAGCCGCGGTTACTTAGAATTGATTCTGAATGTGTCTCATCTATCATCAACAACAATCATGATAATAAAAACAAGAATTTGCACCATCATAATCATCAATTAGCCGCGGACGCGGACGCGGATGCGTTTGGATCGGTTGATATTGATTTTTCTTCTTACAATACACATCATTCTTCTGATCATATGGTTGGTGCTTACTCTAGTGAGAGTTTCCATCACGGTGGTGGTGGTGGTGGCGGCGGCGGCGGTGGAGTTTCGTTGACGTTAGGGTTACAACAACATGGTGGAAATGGAGTGAGTTTGGCTTTTCCATCAACAACACAAAGTCCAATGTTTTATACAAGGGAACAAATTGAAGAGCCGGTTCAATACTCTCTTTTGGATGGTGAAGGAACAAACATTATGCCGTATAGGAATCTCATGGGGACACAATTGCTACATGATTTAGCATGA 1899 0.3955 MARQLCEDEKTSSGGFCYNPQIQGFVSDPEMFNLTTGMEMIGFSKHLHQQQQQQHSTDTNMWKTNFSGGKLSQQHVGPSPSYHPQQHHHHHHQDFTVSETTSNDHQNLNMLHHHHQHHHQDSSSSSQWQQVDDSSLRCVFPYEGNERPSQGLSLSLSSTNPSSLVLQSFELRNTHQIQDQGYQGHFLLKNSKFLLPAQQLLNEFCSLETTKQNDLVSQKQKSQKFNNKQNFEQEHVHNGSTSSSIKHSLTSVEFVELQKRKTKLLSMLEEVDRRYKNYCNQMKSVVSTFEGVAGNGAAKVYSALALKAMSRHFRSLKDGIMEQIERTRKAMGEKDPIAPGTTKGETPRLKILDRVLRQQRAFQQINIMETHPWRPQRGLPERSVSVLRAWLFEHFLHPYPSDVDKHILARQTGLSRSQVSNWFINARVRLWKPMVEEMYLEEEKEQQRNTTTSEGGNNINHEEENLNVLQDQSPTQQPHEDQKPRLLRIDSECVSSIINNNHDNKNKNLHHHNHQLAADADADAFGSVDIDFSSYNTHHSSDHMVGAYSSESFHHGGGGGGGGGGGVSLTLGLQQHGGNGVSLAFPSTTQSPMFYTREQIEEPVQYSLLDGEGTNIMPYRNLMGTQLLHDLA* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0713 632 MobiDBLite consensus disorder prediction 70 102 - -
Psa7g0713 632 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 15 590 - -
Psa7g0713 632 Pfam Associated with HOX 188 320 IPR006563 -
Psa7g0713 632 CDD homeodomain 373 434 IPR001356 GO:0003677
Psa7g0713 632 SUPERFAMILY Homeodomain-like 374 439 IPR009057 -
Psa7g0713 632 SMART HOX_1 373 437 IPR001356 GO:0003677
Psa7g0713 632 SMART prehox3 182 322 IPR006563 -
Psa7g0713 632 Gene3D - 376 454 - -
Psa7g0713 632 PANTHER HOMEOBOX PROTEIN BEL1 HOMOLOG 15 590 - -
Psa7g0713 632 ProSiteProfiles 'Homeobox' domain profile. 370 433 IPR001356 GO:0003677
Psa7g0713 632 Pfam Homeobox KN domain 390 429 IPR008422 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0713 Psa-Chr7 50016461 50020182 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0713 83 632 Homeobox Transcription Factor Family AT5G41410 43.840 4.02e-130 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Psa7g0713 POX 9.6e-45 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0713 - - mtr:MTR_8g098815 930.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g0713 7 50016461 50020182 Psa7g0713 7 50016461 50020182 ECH