Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0702 ATGGCAAATGAGTCTTCTCTTGATCGCGTTGAAGCTGAAACTTTTACTGATTTTCATGGAAACAGCAGTTGTCTTGTTGAGGATCGTGTTGATAGCACTGATCATGACAAAACTAAACAAAAATCTTTGTTTTGTCAATTTTTTCCGGTTTACCTAAAAGAGAGTTGTAGTAGAGGCAATGTGAGGCATCTGCCGGTGATGCTCGGTGACGGTCAATTGCTTGATTTATACCAACTTTTCTCCCTTGTAAAGAAAAATGGTGGGTATGATGTGGTATCTAGAAAAGGGTTGTGGGATTCTGTGATAGTTGAACTGGGTTTGAACCTTCATGTTTTGGCTTCGGTCAAATTGATTTATGATAGATATCTAAATGATTTCGAAGGCTGGCTCAGCAAAACCAATCCAAAGATTGATGGTAATGTAGATGAAGAAAAATTCTGTAATACGGATGATGTCTTGCGTGTTGAAATTTCTGCAGAGAAATTTCATTCTTCCAAACGCAAGCGAGAATCATTATCCGAAATGATAACCTGGATGAGGGATATTGCAAAACATCCGTTTGATCCTGCAGCCCAACCATTACCAGAACCTTCAAAGTGGAAGGGGTGTAAAGGAGGTCAGAACTTCTTTGTTCAGATGCTAAAGGCAAGGGACGTTCTCTTGGTGAGAAAGCATTCAAAACCAAACAGTGGATCATCTTCCCAGAAGGTGAAGATGCATCCTGCCATGTATGAGGATCCTGTTGCTCTTGGTCACCAAGGTACAAAGAAATTGAGATGTAGTGAAAGGATTCCTATTGCTCTTAAATCTCGCTGCAGTTGCTGCAATTCATATCCTGGTAATGGAAATAACTGTCCTCTGGAGAAAACAGCGTCCAAACCAGGTGTAACCGGAAAGAAAAAGTCAACTGCTAAACCAGATGTAGCTGGAAAGAAAAAATCTAAGCCATCTTGGGATGATCTTCATGAAACACTTGTTTCTATAGGTCATCGCTTCCAAGTGGAAGTCCCAGAATGGACTGGTGTAGCTTCTGAGAGTGACTCTAAATGGTTGGGCACACAAGTGTGGCCTGTTAAAGATGATGACTTAAAAGCTACTACTGAATCAGATCTTGCTGGGAGAGGAAGACGAGGTAAGTGTAGCTGCAATGTTCAAGGTTCTGTTGACTGTGTCAGATTTCATATTGCTGAAAACAGGATGAAACTGAAACATGAATTGGGTTATGTATTTTACCAATGTGGATTTGATCGAACGGGCGAGGGGGTTTCACTTCAATGGACAGCTGAAGAAGAAAAGAAATTTAAGGATTTCATGATGTTAAATATCCCCTCTGAAAAGAAGGCTTTTTGGATAAATTTTTGGAAAAATACATTCGATGACTTTCAATTGAAGACAAGAAAAGACATGTTAAACTATTACTTCAATGTTTATCTTATTCAACAAAGAAGCTATCAGAATCGTGTGACTCCAACGGACGTTGACAGCGACGACGACGGAGACGAATTTGGATCTTTTTGTGATGGATTTGGGAGAAGAGCTATCAAGCATCCATCTATGGAGTTCATGGAATGTTCAGAGAACACACAGTGTTTTGATTTTGAGTAG 1605 0.3994 MANESSLDRVEAETFTDFHGNSSCLVEDRVDSTDHDKTKQKSLFCQFFPVYLKESCSRGNVRHLPVMLGDGQLLDLYQLFSLVKKNGGYDVVSRKGLWDSVIVELGLNLHVLASVKLIYDRYLNDFEGWLSKTNPKIDGNVDEEKFCNTDDVLRVEISAEKFHSSKRKRESLSEMITWMRDIAKHPFDPAAQPLPEPSKWKGCKGGQNFFVQMLKARDVLLVRKHSKPNSGSSSQKVKMHPAMYEDPVALGHQGTKKLRCSERIPIALKSRCSCCNSYPGNGNNCPLEKTASKPGVTGKKKSTAKPDVAGKKKSKPSWDDLHETLVSIGHRFQVEVPEWTGVASESDSKWLGTQVWPVKDDDLKATTESDLAGRGRRGKCSCNVQGSVDCVRFHIAENRMKLKHELGYVFYQCGFDRTGEGVSLQWTAEEEKKFKDFMMLNIPSEKKAFWINFWKNTFDDFQLKTRKDMLNYYFNVYLIQQRSYQNRVTPTDVDSDDDGDEFGSFCDGFGRRAIKHPSMEFMECSENTQCFDFE* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0702 534 Gene3D - 23 140 IPR036431 GO:0003677
Psa7g0702 534 ProSiteProfiles ARID domain profile. 38 131 IPR001606 GO:0003677
Psa7g0702 534 SMART ARID_2 35 127 - -
Psa7g0702 534 SUPERFAMILY ARID-like 36 136 IPR036431 GO:0003677
Psa7g0702 534 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 6 534 - -
Psa7g0702 534 SMART ELM2_2 326 377 IPR000949 -
Psa7g0702 534 SMART bright_3 39 132 IPR001606 GO:0003677
Psa7g0702 534 CDD ARID 57 127 - -
Psa7g0702 534 Pfam ARID/BRIGHT DNA binding domain 52 127 IPR001606 GO:0003677
Psa7g0702 534 MobiDBLite consensus disorder prediction 293 316 - -
Psa7g0702 534 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 6 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0702 Psa-Chr7 48026598 48031440 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Psa7g0702 ARID 3.3e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0702 - - gmx:100819320 410.609