Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0698 ATGATCATATCAGAGAAGAATCGCAAAGAAATCTGCAAATACCTCTTTCAAGAGGGTGTATGCTACGCCAAGAAAGATTTCAATTTGGCAAAGCACCCAGAAATCGATGTTCCCAATTTGCAGGTGATTAAGCTTATGCAAAGCTTCAAATCCAGGGAATATGTTAGGGAAACTTTTGCGTGGATGCATTATTACTGGTTCCTTACAAACGATGGAATTGAGTTTCTCAGAACTTACCTAAATCTTCCTTCTGAAATTGTACCTGCCACTTTGAAGAAACAGGCTAAGCCTGCTGGTAGACCTTTCGGTGGTCCACCCGGTGATCGCCCTAGGGGTCCATCAAGATTTGAAGGGGAACGTAGATTTGGAGGTGACCGAGATGGATACCGGGGAGGTCCTAGAGGACCTGGTGGTGAATTTGGAGGAGACAAGGGAGGTGCTCCTGCTGATTACAGACCCTCATTTGGGGGTCCTGGTGGAAGACCTGGCTTTGGTCGTGGATCTGGTGGTTTTGGAGCACCAACTAGTTCAAATGATGCTTAA 543 0.4604 MIISEKNRKEICKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSREYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPSRFEGERRFGGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGSGGFGAPTSSNDA* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0698 180 Pfam Plectin/S10 domain 3 94 IPR005326 -
Psa7g0698 180 PANTHER 40S RIBOSOMAL PROTEIN S10-1-LIKE 1 178 - -
Psa7g0698 180 Gene3D - 1 104 IPR036388 -
Psa7g0698 180 PANTHER 40S RIBOSOMAL PROTEIN S10 1 178 IPR037447 -
Psa7g0698 180 MobiDBLite consensus disorder prediction 112 128 - -
Psa7g0698 180 MobiDBLite consensus disorder prediction 92 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0698 Psa-Chr7 47702379 47704506 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0698 1 155 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 82.581 3.69e-76 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0698 K02947 - gmx:100500445 228.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g0698 7 47702379 47704506 Psa7g0698 7 47702379 47704506 ECH
Psa2g4178 2 421806437 421808392 Psa7g0698 7 47702379 47704506 PCT