Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0680 ATGGATGAGCTTGCATTCTTAATGGATTGGGATTTGGAAGCGATCAATGAAACTCCAACAACCAACACCAACACTTATTTTTCTCAATTATTCTCTGAGTTGCAACATGATGAGTTGTTATTTGCCAATTTTCCTGAATTTTCAGAAACCGCTAATGTTCTTATTGATGAATTTCAAGAACTTTGCAAACCTTTTTACCCTCTTTCATCTCAAACAGTTGTTACAAACTCTATGATTATCCCTAAAGAGCTTGAAGAAGTCAAAGAAATTAAAGTTTCAGATCAGAAATTAGCTTCTCAAGATCTGCAAGTTTCTGCAGTTTCTAAATGTAAAAAAAGCAAGAAAAGCAAGAGCAAGAGTATAGTGAAGAAAGTAACCGCAGTGGATGGCACTCTCTGTGATGCATGGGCATGGAGAAAATACGGACAAAAACCGATAAAGGGTTCACCTTATCCTCGAAGCTACTACAGATGCAGCAGTTCCAAAGGATGTCTTGCAAAGAAACAGGTTGAGAAGAATCATTTAGATCCAAGAGTTTATTTGGTTACATACACTGCAGAACACAATCATGCTCAACCAACTAGAAGAAATTCGTTAGCAGGAAGCACTAGGAAGAACAATCTGTTAGCTACAAATTCTTCAACAGCACCTTTGGTGAAAATTCAAGATGAGGTAACTGTGATGACAAGTGTGCAGATGAAAGATGAGGAAGATCATCATCTTCTTGAATGGTTGGAGGGTGCTCAATTATGTGATGATGGTTGGATTCCAAATAAAGAGTTAGATGAATATTTCATTGGACTAGATAAGTGCCAATAA 819 0.37 MDELAFLMDWDLEAINETPTTNTNTYFSQLFSELQHDELLFANFPEFSETANVLIDEFQELCKPFYPLSSQTVVTNSMIIPKELEEVKEIKVSDQKLASQDLQVSAVSKCKKSKKSKSKSIVKKVTAVDGTLCDAWAWRKYGQKPIKGSPYPRSYYRCSSSKGCLAKKQVEKNHLDPRVYLVTYTAEHNHAQPTRRNSLAGSTRKNNLLATNSSTAPLVKIQDEVTVMTSVQMKDEEDHHLLEWLEGAQLCDDGWIPNKELDEYFIGLDKCQ* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0680 272 PANTHER WRKY TRANSCRIPTION FACTOR 63-RELATED 9 241 - -
Psa7g0680 272 Pfam WRKY DNA -binding domain 134 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa7g0680 272 SMART WRKY_cls 132 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa7g0680 272 SUPERFAMILY WRKY DNA-binding domain 131 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa7g0680 272 ProSiteProfiles WRKY domain profile. 127 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa7g0680 272 Gene3D WRKY domain 115 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa7g0680 272 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 9 241 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0680 Psa-Chr7 46697717 46699375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0680 1 252 WRKY Transcription Factor Family AT4G23550 36.691 4.48e-52 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Psa7g0680 WRKY 4.2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0680 K13426 - gmx:102663255 246.128
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g0680 7 46697717 46699375 Psa7g0680 7 46697717 46699375 ECH
Psa7g0680 7 46697717 46699375 Psa6g4466 6 391533094 391535039 ECH
Psa7g0680 7 46697717 46699375 Psa4g3640 4 305536081 305538160 ECH
Psa7g0680 7 46697717 46699375 Psa3g2448 3 208140583 208142462 ECH