Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0669 ATGGACGATACGTTGCTTGACGATATCATTCGGAAGCTTGTATCGGCGAAGAACGGTAGAACGACGAAGCAAGTGAATCTTACGGAGGCGGATATTCGTCAGCTTTGTACTTCGGCGAAGGAGATTTTTCTCAGTCAACCTAATCTTCTTGAGCTTGAAGCTCCTATCAAAATCTGTGGAGACGTCCACGGCCAGTTTTCAGACCTTTTAAGACTGTTCGAATATGGGGGATACCCACCTGAAGCCAATTATTTATTTCTTGGTGATTATGTTGATCGTGGTAAGCAGAGCATAGAGACAATATGCTTACTTCTTGCATACAAAATCAAATACAAGGAGAACTTCTTTCTACTCAGGGGTAACCACGAATGTGCCTCCATCAATCGCATATATGGTTTCTATGATGAGTGCAAGAGGAGGTTCAATGTTCGACTCTGGAAGACATTTACTGATTGCTTTAACTGTTTACCGGTTGCTGCTCTAGTTGATGAGAAGATCCTTTGTATGCATGGTGGTCTCTCTCCAGAACTTAAAAACTTAGATCAGATACGGAATATTGCTCGCCCTATTGATGTGCCAGATCATGGCCTTCTCTGTGACCTTCTCTGGGCTGATCCCGATAAAGATCTTGAGGGATGGGGAGAAAATGATCGAGGTGTGTCATTCACATTTGGGGCTGATAAGGTTGCTGAGTTTCTTGAGCACCATGATCTTGATCTGATTTGTAGAGCTCACCAGGTTGTAGAAGATGGATATGAGTTTTTTGCCAAACGTAAGCTGGTGACTATATTCTCTGCACCAAATTACTGTGGTGAGTTTGATAACGCGGGTGCTATGATGAGTGTGGATGACACATTGACGTGCTCTTTCCAGATACTTAAGTCTTCCGATAAGAAGGGGAAAGGTGGGTTTGGCAATAACACATCAAGACCTGGAACTCCACCTCATAAGGGTGGGAAGACTTAA 966 0.4348 MDDTLLDDIIRKLVSAKNGRTTKQVNLTEADIRQLCTSAKEIFLSQPNLLELEAPIKICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKIKYKENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKTFTDCFNCLPVAALVDEKILCMHGGLSPELKNLDQIRNIARPIDVPDHGLLCDLLWADPDKDLEGWGENDRGVSFTFGADKVAEFLEHHDLDLICRAHQVVEDGYEFFAKRKLVTIFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKSSDKKGKGGFGNNTSRPGTPPHKGGKT* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0669 321 MobiDBLite consensus disorder prediction 299 321 - -
Psa7g0669 321 CDD MPP_PP1_PPKL 6 294 - -
Psa7g0669 321 Pfam Calcineurin-like phosphoesterase 55 247 IPR004843 GO:0016787
Psa7g0669 321 ProSitePatterns Serine/threonine specific protein phosphatases signature. 118 123 IPR006186 GO:0016787
Psa7g0669 321 Pfam Serine-threonine protein phosphatase N-terminal domain 6 53 IPR031675 -
Psa7g0669 321 SUPERFAMILY Metallo-dependent phosphatases 22 297 IPR029052 -
Psa7g0669 321 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP1 ISOZYME 3 1 319 - -
Psa7g0669 321 SMART pp2a_7 27 297 IPR006186 GO:0016787
Psa7g0669 321 PRINTS Serine/threonine phosphatase family signature 55 82 IPR006186 GO:0016787
Psa7g0669 321 PRINTS Serine/threonine phosphatase family signature 84 111 IPR006186 GO:0016787
Psa7g0669 321 PRINTS Serine/threonine phosphatase family signature 117 141 IPR006186 GO:0016787
Psa7g0669 321 PRINTS Serine/threonine phosphatase family signature 151 177 IPR006186 GO:0016787
Psa7g0669 321 PRINTS Serine/threonine phosphatase family signature 180 207 IPR006186 GO:0016787
Psa7g0669 321 PRINTS Serine/threonine phosphatase family signature 237 257 IPR006186 GO:0016787
Psa7g0669 321 PRINTS Serine/threonine phosphatase family signature 259 275 IPR006186 GO:0016787
Psa7g0669 321 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 1 319 - -
Psa7g0669 321 Gene3D - 1 305 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0669 Psa-Chr7 45610271 45614669 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0669 56 240 Calmodulin-binding Proteins AT5G63870 29.545 8.53e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0669 K06269 - gmx:100790490 629.402