Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0667 ATGCCGAATGTGACCAAATTTCGAGAAACCATTTCAAGGATCTTGAAAGCACCGATTATTACTGCCCTACATGTAGAGGCAAGTTTGACTTTGAGTTATCTGATTCAGAAAAAATCAAAGACAAAAGTCAGATCGAACCGAAACAGTGGGCAGCTAGTGCTTTCAACTAAGGTCAATGTTCTCTGCAATGGTGTGCAAGGCATATATTTTCCAAGCCTACACTTAGTTGTGTGCAAGTGTGGTTTTTGTGGGACAGAAAAACAAGCTCTTAGCGAATGGGAAAGGCACACGGGTTCCAAATTAAGAAATTGGAAAACAAGTATTACTGTGAAAGACTCTAGGCTACCTTTGGAACAATGGATGCTGCAGGTTGCCGAAGTTCATGCTAATGCTCTAGTTTCCGTCAAACCTAAAAAAACCTTCTTTAAAAGAAAGGAAGCAGAAGTTGCTTACCTTCTTGAAAGAGAGGTACGAACCTGTTTATGTAAGTGGACTACAGAGCGCTGTGCTGTTTGTAGATGGGTTGAAGACTGGGACTACAATAAAATTATCATTTGCAACAGATGTCAAATAGCTGTTCACCAAGAATGCTATGGAGTATTAAATGTTAGAGACTTTACATCTTGGGTCTGTAAAGCCTGCGAGACACCTAAAATCAAGCGGGAGTGTTGTCTTTGTCCTGTAAAAGGTGGTGCTCTAAAGCCAACCGATATTGACACATTATGGGTTCATGTCACCTGTGCTTGGTTTCGACCTGAAGTCTCGTTTGCTAGTGATGAGAAAATGGAACCTGCTTTGGGAATTCTTAGTATTACGATATTGACACATTATGGGTTCATGTCACCTGTGCTTGGTTTCGACCTGAAGTCTCGTTTGCTAGTGATGAGAAAATGGAACCTGCTTTGGGAATTCTTAGTGGAACATCGGGGGTTAATTCCGCTGTCTGCGTCGATGGGTGAGCCGCTGCAGTTGCCGTCACCGTTTGATTGTGTTTTGGGTGGACCTTGGTTTCAAAGTGGGTGCGGCATCGAACTGTACTTTGAGGCTAAATCACTTGAAGAAAAGATAGTCCAATTTCCTTCTGTTGATGAATTGTTGTCTACTTGCGCAAAACTTCTGATGAAAGAACCTCTTGCATTTCCTGTCCGTGACTTGCTTGTGATGATATGCTCCCAGGATGATGCTGCTGCCAAGAGTGGATTGATCAGAATTTCCTCTGATCTACTCAACCAGTGGGGGCATGCAGTGGAGCGAATGAGTTCTTTCAGAACTGAAACCATGTTAGACACAACTGCAATGGCTCTTTCAGCAATTGTCATTGCGAGGTTCCTCACGACCATTAGGAAGAGCTTGAGCGGACGCGGGGTTATAAGAACCTATACAAAACAGCTTTTAGAGGGGCTCGAATATCTTCACAATAACAGAATTATTCATCGGGATATTAAGGGTGCAAACATTCTAGTTGATAACAAAGGGTGTATTAAACTCGCAGACTTTGGTGCATCCAGGAAAGTCGTGGAATTGGCTACCATAAATGGAGCAAAGTCTATAAAGGGTACCCCACACTGGATGTCACCTGAAGTTATTTTACAGACAGGATATACAACCTCTGCTGATATATGGAGTGTTGCATGCACTGTGATAGAGATGGCCACAGGAAAGCCTCCATGGAGTCAACAGTATCCCCAGGGGGTGTCAACTCTTTTCTACATTGGGACAACTAGATCTCATCCACCAATACCTGAACATCTGTCTGCTGAGGCAAAGGACTTTTTGCTGAAATGCTTTCACAAGGAACCGGATTTAAGACCTTCTGCATCAGACTTAAAGGACTTTTTGCTGAAATGCTTTCACAAGGAACCGGATTTAAGACCTTCTGCATCAGACTTGTTACTGCATCCATTCATCACATGCGAGTATCAGGAATCTCATTCAATATCACGCAGTTCAGTCAGGGACTCTTGCAATCGGATGGCAACAGATGGGATGAACTCTAGGAACTTTTTGGATTCTATCCAAGGATCAACGTGTACAGGCCTAAAGGATGTTTGTCAGATGGATAGTTTAAGGTTCTCGAATGCAAATCTTCTAAAACCAGGTTCCTACCAGGGAGCAGGAAACTATGACGATGACATGTGTCAGATGGATGATGAAGATGATATTTTCGCTGCATCATCAGTAAAAGCTAACCCTCTACTTGCTGCTGACGACATAAAGAGTTTCAATCCAATGTGCGAACCTGTGGAGGATGGCTGGTCTTGCAAGTCAGACGAAACACTAAATTTAAAGAAAAGCAGATTGAACTTGTCCCCAGATCAAACTATTAGGATAACTATGAGTCCCAAACCATCTCCTAATGCAGAGAAGGAGTTTTCATTTTCAAGTGAACCTCTTGGAGTTGAAGATGATGATGAAGTGACAGAGTGCAAAATTAGAGCTTTCCTGGATGACAAGGCATTCGAACTGAATAAGCTCCTGCACATTCCGGAGCAGCTCACCAAGGCTATTCCAGCGAACCAATTTCAATTCGGCAAAGGCTACCGTAGTGAAGCACTTGCCTCTCTGATTTTGAACAACAATGACCTGCACGGAAAGATTCCGGAGCAGCTCACCAAGGCTATTCCAGCGAACCAATTTCAATTCGGCAAAGGCTACCGTAGTGAAGCCAAGTTAACGATATCGTGCCCGAACAGGCTCTACAATATTGGTTTAGCACACAGATAG 2724 0.4317 MPNVTKFRETISRILKAPIITALHVEASLTLSYLIQKKSKTKVRSNRNSGQLVLSTKVNVLCNGVQGIYFPSLHLVVCKCGFCGTEKQALSEWERHTGSKLRNWKTSITVKDSRLPLEQWMLQVAEVHANALVSVKPKKTFFKRKEAEVAYLLEREVRTCLCKWTTERCAVCRWVEDWDYNKIIICNRCQIAVHQECYGVLNVRDFTSWVCKACETPKIKRECCLCPVKGGALKPTDIDTLWVHVTCAWFRPEVSFASDEKMEPALGILSITILTHYGFMSPVLGFDLKSRLLVMRKWNLLWEFLVEHRGLIPLSASMGEPLQLPSPFDCVLGGPWFQSGCGIELYFEAKSLEEKIVQFPSVDELLSTCAKLLMKEPLAFPVRDLLVMICSQDDAAAKSGLIRISSDLLNQWGHAVERMSSFRTETMLDTTAMALSAIVIARFLTTIRKSLSGRGVIRTYTKQLLEGLEYLHNNRIIHRDIKGANILVDNKGCIKLADFGASRKVVELATINGAKSIKGTPHWMSPEVILQTGYTTSADIWSVACTVIEMATGKPPWSQQYPQGVSTLFYIGTTRSHPPIPEHLSAEAKDFLLKCFHKEPDLRPSASDLKDFLLKCFHKEPDLRPSASDLLLHPFITCEYQESHSISRSSVRDSCNRMATDGMNSRNFLDSIQGSTCTGLKDVCQMDSLRFSNANLLKPGSYQGAGNYDDDMCQMDDEDDIFAASSVKANPLLAADDIKSFNPMCEPVEDGWSCKSDETLNLKKSRLNLSPDQTIRITMSPKPSPNAEKEFSFSSEPLGVEDDDEVTECKIRAFLDDKAFELNKLLHIPEQLTKAIPANQFQFGKGYRSEALASLILNNNDLHGKIPEQLTKAIPANQFQFGKGYRSEAKLTISCPNRLYNIGLAHR* 908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0667 907 Pfam Protein kinase domain 448 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g0667 907 PANTHER MAP KINASE KINASE KINASE 455 609 - -
Psa7g0667 907 PANTHER MAP KINASE KINASE KINASE 610 826 - -
Psa7g0667 907 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 162 219 IPR013083 -
Psa7g0667 907 ProSitePatterns Serine/Threonine protein kinases active-site signature. 476 488 IPR008271 GO:0004672|GO:0006468
Psa7g0667 907 Pfam PHD-zinc-finger like domain 222 265 - -
Psa7g0667 907 Pfam PHD-finger 181 215 - -
Psa7g0667 907 SUPERFAMILY Protein kinase-like (PK-like) 456 611 IPR011009 -
Psa7g0667 907 Gene3D Transferase(Phosphotransferase) domain 1 443 609 - -
Psa7g0667 907 ProSiteProfiles Zinc finger PHD-type profile. 166 217 IPR019787 -
Psa7g0667 907 CDD PHD_ATX3_4_5_like 168 214 IPR042011 -
Psa7g0667 907 ProSiteProfiles Extended PHD (ePHD) domain profile. 220 271 IPR034732 -
Psa7g0667 907 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 455 609 - -
Psa7g0667 907 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 610 826 - -
Psa7g0667 907 SMART serkin_6 372 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g0667 907 SMART PHD_3 168 215 IPR001965 -
Psa7g0667 907 Gene3D Transferase(Phosphotransferase) domain 1 610 664 - -
Psa7g0667 907 SUPERFAMILY Protein kinase-like (PK-like) 608 648 IPR011009 -
Psa7g0667 907 SUPERFAMILY FYVE/PHD zinc finger 166 231 IPR011011 -
Psa7g0667 907 CDD STKc_MAPKKK 456 636 - -
Psa7g0667 907 ProSiteProfiles Protein kinase domain profile. 326 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0667 Psa-Chr7 45239126 45244666 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0667 456 825 MAP Kinase Kinase Kinase AT3G06030 52.646 3.27e-112 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Psa7g0667 Pkinase 4.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0667 - K20606 ccaj:109794823 488.804