Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0639 ATGAAGTTTCTTCATGTTTCGTGTTTTGTTATATGCTTATTGTGTTTGTGGAAAGGAAATTGTGAACCTGTTGAAGATAAAGAGGTTTTGCTTGATTTTGTGAACAAGTTTCCACCTTCAAGGACATTGAATTGGAATGAGAGTTTCTCTGTTTGTGATAATTGGACTGGTGTAACTTGTAATCAAGATAGGTCTAGAGTTATAGCGATTCGTTTACCGGGTGTTGGGTTTCATGGAAATATTCCACCTGGTACTATTAGCAATCTTTCAGAGCTTCAAATTCTGAGTCTAAGATCCAATTTCATAACTGGGTTTTTTCCTTCTGATTTTTCTAATTTGAAAAACTTGTCTTTTCTTTATCTTCAGTTCAATAATTTGTCTGGTTCTTTGCCTGATTTTTCAGCTTGGAGGAATCTTACTGTTGTTAATTTGTCTAGTAACAGATTTAATGGGACTATTCCTTTTTCACTTTCTAATTTGACTCAACTTTCTGGTTTGAACCTTGCGAATAATCATCTTTCTGGGGATATTCCTGATCTGAATTTGTCGAGGTTGCAGATGCTGAATTTGTCTAACAATAATTTACATGGCACTGTGCCGAGATCATTATGGAGGTTTCCTGAATCGGCGTTTGTCGGGAATAACGTAACTCTTGGAAATTATAGTGTTGTTCCGCCTGTGCCTTCGCCGGTTTATGTTAGGTCTTCGACCTCGGGGAAACGTGGGAGGCTGAGTGAAGCGGCGCTGCTTGGAATTATTGTTGTTGGTAGTTTTCTTGGGCTTGTGGGATTTGGTTTTTTGATGTTTGTGTGCTTTTGTGCTAGAAAAAAGGATGAAGATGATTATGATGATGATGCATTTGTTGGAAAGTCATCGAATAAGGGAAAAATGTCTCCGGAAAAGGCAGTTTCGAGGAACATGGATGCTAATAATAAACTGTCCTTCTTCGAGGGATGTAATTATGCCTTTGATTTAGAAGATTTGTTGAGAGCTTCCGCCGAGGTGTTAGGAAAGGGAACTTTTGGTACTGCTTACAAGGCGATCCTTGAGGACGCGACTGCGGTTGTTGTGAAGCGATTGAAGGAGGTAGCCTTTGGAAAGAAGGACTTTGAGCAATACATGGAGATTGTTGGAAGCCTAAAACATGAGAATGTGGTTGAGCTGAAAGCTTATTATTATTCGAAAGACGAGAAACTGATGGTATATGATTACTACAGTCAAGGGAGTGTCTCTTCTTTGTTGCATGGGAAAAGAGGAGAAGAGAAGGTGCCTTTAGATTGGGATACTCGGTTGAGAATCGCTTTAGGTGCAGCAAGAGGGATCGCTCGCACCCATGTTGAGAATAGCGGTAAACTTGTACATGGAAACATCAAGTCTTCGAATATCTTTCTCAATACTAAGCAATACGGCTGTGTATCTGATCTTGGTCTAGCATCGATATCAACGTCCCTCGCCCTACCAATCTCACGAGCAGCCGGTTACCGGGCACCCGAAGTTACTGACACGAGGAAAGCAGCGCAACCTTCAGATGTTTACAGCTTCGGCGTGGTGTTACTAGAGCTTCTAACTGGGAAATCACCTATCCACACAACCGGTGGCGATGAGTTTGTCCACTTGGTGAGATGGGTTCATTCGGTCGTGCGAGAGGAGTGGACGGCCGAAGTATTTGACTTAGAGTTGATGAGATATCCAAATATAGAAGAAGAGATGGTTGAGATGTTGCAGATAGCGATGTCGTGTGTGGTAAGAATGCCTGATCAGAGACCTAAGATGTCGGAAGTTGTGAAGATGATTGAAAATGTGAGACAGATTGATAATACTCAGACTCGAGCGTCGTCTGAGAACCAAGCAGAAGTTAGGTTATCGTCTCAAAGCGAGACCGATAATGAGAACATTAACTCCTCTTCTTCCCCTTTACCAAAAGGAAGTGAATGA 1935 0.4155 MKFLHVSCFVICLLCLWKGNCEPVEDKEVLLDFVNKFPPSRTLNWNESFSVCDNWTGVTCNQDRSRVIAIRLPGVGFHGNIPPGTISNLSELQILSLRSNFITGFFPSDFSNLKNLSFLYLQFNNLSGSLPDFSAWRNLTVVNLSSNRFNGTIPFSLSNLTQLSGLNLANNHLSGDIPDLNLSRLQMLNLSNNNLHGTVPRSLWRFPESAFVGNNVTLGNYSVVPPVPSPVYVRSSTSGKRGRLSEAALLGIIVVGSFLGLVGFGFLMFVCFCARKKDEDDYDDDAFVGKSSNKGKMSPEKAVSRNMDANNKLSFFEGCNYAFDLEDLLRASAEVLGKGTFGTAYKAILEDATAVVVKRLKEVAFGKKDFEQYMEIVGSLKHENVVELKAYYYSKDEKLMVYDYYSQGSVSSLLHGKRGEEKVPLDWDTRLRIALGAARGIARTHVENSGKLVHGNIKSSNIFLNTKQYGCVSDLGLASISTSLALPISRAAGYRAPEVTDTRKAAQPSDVYSFGVVLLELLTGKSPIHTTGGDEFVHLVRWVHSVVREEWTAEVFDLELMRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMSEVVKMIENVRQIDNTQTRASSENQAEVRLSSQSETDNENINSSSSPLPKGSE* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0639 644 Gene3D Ribonuclease Inhibitor 135 222 IPR032675 -
Psa7g0639 644 PANTHER OS05G0588300 PROTEIN 18 609 - -
Psa7g0639 644 Pfam Protein kinase domain 333 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g0639 644 Gene3D Phosphorylase Kinase; domain 1 296 404 - -
Psa7g0639 644 ProSiteProfiles Protein kinase domain profile. 330 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g0639 644 Gene3D Ribonuclease Inhibitor 25 134 IPR032675 -
Psa7g0639 644 MobiDBLite consensus disorder prediction 607 644 - -
Psa7g0639 644 Pfam Leucine rich repeat N-terminal domain 25 61 IPR013210 -
Psa7g0639 644 ProSitePatterns Protein kinases ATP-binding region signature. 336 358 IPR017441 GO:0005524
Psa7g0639 644 PANTHER PROTEIN, PUTATIVE-RELATED 18 609 - -
Psa7g0639 644 SUPERFAMILY L domain-like 37 205 - -
Psa7g0639 644 Pfam Leucine rich repeat 80 126 IPR001611 GO:0005515
Psa7g0639 644 SMART LRR_typ_2 89 112 IPR003591 -
Psa7g0639 644 SMART LRR_typ_2 182 206 IPR003591 -
Psa7g0639 644 SMART LRR_typ_2 113 135 IPR003591 -
Psa7g0639 644 ProSiteProfiles Leucine-rich repeat profile. 162 184 IPR001611 GO:0005515
Psa7g0639 644 SUPERFAMILY Protein kinase-like (PK-like) 334 599 IPR011009 -
Psa7g0639 644 Gene3D Transferase(Phosphotransferase) domain 1 406 628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0639 Psa-Chr7 41760650 41764855 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0639 16 625 Receptor kinase-like Gene Family AT4G23740 64.725 0.0 785
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Psa7g0639 Pkinase 5.8e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0639 - - gmx:100804799 966.837
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g0639 7 41760650 41764855 Psa7g0639 7 41760650 41764855 ECH
Psa2g4216 2 423069802 423072981 Psa7g0639 7 41760650 41764855 PCT