Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0637 ATGTTTACATCTTCCAACATCATCAAACACACTCATCATTGCTTCAAACAAATCAAACTCATCAACAATATTACATATAACATGAACCTTCACTATCCCAAAACTGTACGAATATGTTACACCGACGAAGACGCCACCGACTCTTCCTCCGACGATAGCCAACCGCCGCGCCGCAGAGTCAAGACTTTCGTCAACGAGATCACCATGGCCAACAGAAACATTCCGAGGAAAAATAACAAGTCTGCATCTACTACCACAACCACTACCACCAGACGTAAAATCAAAACCAGAACCAGAGCTCCGGCTAGCCAACAACAGCCGGTCATTAACTCCGGGAAGAAATACCGAGGAGTGAGACAGAGACCTTGGGGGAAATGGTCGGCGGAGATAAGAGATCACAGAACGCGCGTAAGACTGTGGTTAGGAACTTACAACACTGCTGAAGAAGCTGCTAAGGAGTATGATAAAGCTGCCATTAAAATTCGTGGTGCAAACGCGGTTACAAATTTTATTCATCCGGTTCAGGAGATTACAAACTCTGATAACATTTCCGGTGAAGAATGTGTAAGCAACAACGTTGTATCTGCAACTTCAGTACTTGGTCAGTGTAGTATTTCAGAAAGTGAACCAGAAACAGTTAAAGAAGATGTTGTTGCTGTTGTTGTTCCCGTTCCAACGAGTGGTGAATCTGATAAAAAGTTGAAATCTGATTCTGAGTCAGTTTTTCCGCTTCCTTGTGATAGTTTATTTGATGGTGTATTTGGTAATGAGAGAGAGATGGAAAACATGTTCTTTTTTCCTGGTGATGATTTTAGTGGCAATTTTGTTGATACTAGGAGTCCAAATTTGTTGAACTGGAACAGAGATTATGATATTTTTCAGGATATAGGGGATTTGTTTGGTTCGGATTTTGGTACTTCTGTTTGA 927 0.4142 MFTSSNIIKHTHHCFKQIKLINNITYNMNLHYPKTVRICYTDEDATDSSSDDSQPPRRRVKTFVNEITMANRNIPRKNNKSASTTTTTTTRRKIKTRTRAPASQQQPVINSGKKYRGVRQRPWGKWSAEIRDHRTRVRLWLGTYNTAEEAAKEYDKAAIKIRGANAVTNFIHPVQEITNSDNISGEECVSNNVVSATSVLGQCSISESEPETVKEDVVAVVVPVPTSGESDKKLKSDSESVFPLPCDSLFDGVFGNEREMENMFFFPGDDFSGNFVDTRSPNLLNWNRDYDIFQDIGDLFGSDFGTSV* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0637 308 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 7 303 - -
Psa7g0637 308 MobiDBLite consensus disorder prediction 77 106 - -
Psa7g0637 308 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF2 7 303 - -
Psa7g0637 308 SMART rav1_2 114 177 IPR001471 GO:0003700|GO:0006355
Psa7g0637 308 PRINTS Ethylene responsive element binding protein signature 115 126 IPR001471 GO:0003700|GO:0006355
Psa7g0637 308 PRINTS Ethylene responsive element binding protein signature 137 153 IPR001471 GO:0003700|GO:0006355
Psa7g0637 308 MobiDBLite consensus disorder prediction 77 91 - -
Psa7g0637 308 Pfam AP2 domain 114 163 IPR001471 GO:0003700|GO:0006355
Psa7g0637 308 ProSiteProfiles AP2/ERF domain profile. 114 171 IPR001471 GO:0003700|GO:0006355
Psa7g0637 308 SUPERFAMILY DNA-binding domain 114 171 IPR016177 GO:0003677
Psa7g0637 308 CDD AP2 113 170 IPR001471 GO:0003700|GO:0006355
Psa7g0637 308 Gene3D AP2/ERF domain 113 172 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0637 Psa-Chr7 41513907 41514938 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0637 34 210 AP2-EREBP Transcription Factor Family AT4G27950 45.312 8.64e-39 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Psa7g0637 AP2 1.8e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0637 - - mtr:MTR_8g099215 227.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g0637 7 41513907 41514938 Psa7g0637 7 41513907 41514938 ECH
Psa2g4219 2 423113623 423114582 Psa7g0637 7 41513907 41514938 PCT