Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0571 ATGGAAGATGCTGAAACGAAAGAAAGAATCGAAGAAACAGTTCTGAAGATCTTACAAGAATCAAACATGGATGAAGTCACTGAATCCAAGATTCGTAAGCAAGCCTCCAACGAACTCGACCTCAACCTATCTCAGCCTCCTTTCAAAGCCTTAGTCAAGCAAATAATCGAAGCTTTTCTCAAACAGAAGCAGCAACAGCAAGAGGAAGAGGAAGAAGAAAAGGAGGAAGAAGAAAAACAAAAGCTCAAACAAGTGGGAGTTTCCAGCAGAAACAACAATGTCTATGATGATTCCGGCGATCTCGTTATCTGCGAGCTTGGAAAAAAGAGAAAAGTGACAATTCAGGATTTCAAAGGGAGAACTTTTGTCTCCATTAGGGAGTTTTATTCCAAGGATGGCAAGGAACTTCCTTCTTCTAAAGGAATAAGTTTGACTGGGGAGCAGTGGTCAACCTTTAAGAAAAGTGTGCCAGCCATAGAAAAAGCCATTCAGAAAATGGAGTCGCGTGTATAA 513 0.4094 MEDAETKERIEETVLKILQESNMDEVTESKIRKQASNELDLNLSQPPFKALVKQIIEAFLKQKQQQQEEEEEEKEEEEKQKLKQVGVSSRNNNVYDDSGDLVICELGKKRKVTIQDFKGRTFVSIREFYSKDGKELPSSKGISLTGEQWSTFKKSVPAIEKAIQKMESRV* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0571 170 Pfam Transcriptional Coactivator p15 (PC4) 104 154 IPR003173 GO:0003677|GO:0006355
Psa7g0571 170 Gene3D Transcriptional Coactivator Pc4; Chain A 93 170 IPR009044 GO:0003677|GO:0006355
Psa7g0571 170 MobiDBLite consensus disorder prediction 63 86 - -
Psa7g0571 170 SUPERFAMILY DEK C-terminal domain 4 60 - -
Psa7g0571 170 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 4 169 IPR045125 GO:0003713|GO:0060261
Psa7g0571 170 Pfam DEK C terminal domain 5 60 IPR014876 -
Psa7g0571 170 SUPERFAMILY ssDNA-binding transcriptional regulator domain 103 165 IPR009044 GO:0003677|GO:0006355
Psa7g0571 170 PIRSF RNA_polymII_KELP 1 170 IPR017415 -
Psa7g0571 170 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR KELP 4 169 - -
Psa7g0571 170 Coils Coil 53 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0571 Psa-Chr7 38236774 38239393 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Psa7g0571 DEK_C 6.3e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0571 K25815 - gmx:100305633 205.682