Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0555 ATGGCTTCCACTCCCAAGAAGTCACTTCAATCTCCTTCAAAATCCAAGCTCCGATCACAATTCTCACCTGTTGCAGCACCCGTTACTCCAAATTCCTTACCTGCACGTAGATCCACGCGCTTGAATTCACTCCTCACCGATTCTCCCCAAACTCCCAACCTCGTTGATGCATTCAACGAATCTCAAAACCAAGATGAAACTCCGAAGAGAGGGAGAAGAATTGGACAGTATACTGAACCTGCTGCGAAATCTCGTCTTAATTTTGATTTCTCTCGCAAAGACAAAGTTGTAACTCGCAATAATGCGAGCAAACTAGAAAATGGAAAAGATACTGCTCAATTTTTGAACAAGAGAGATAAGAAGAGTGAATCAGATGTAGTTCCATTTGCTCTACAATCCCCGGATAAACCGAAATCTGCAAAGAGGAAGAAGGAGAAGGAAGATGAGAAAACAGTTGAATTGTCGAAGAAGAGAAATGGGAAGGATAAGTCTGTTAAGGTTTTGTTTGCTCCGACATCACCCGAACAATCAGAAACTAAGAAGAGGAAGAGGAAGAATGTGTTTGAAAAAAAGGTTGTTACCAAAGGTAAAGCTGCTGCGAGTAAAGGGGGGAAAATTGCGAAGGTGCAGTATTATAAAAAAGTTGTTTATGATGGTGGTGAGTTTGAAGTTGGGGATGATGTTTATGTGAAAAGGATTGAAGATGCTACCTCTGATGAGGAAGATCCTGAAGTAGAGGAGTGTAAGTTGTGTTTTTGCTTTGGAAATGAAATCATGATTGAGTGTGATAGTTGTTTGGGTGGGTTTCATTTGAAATGCTTGAAGCCGCCTCTGAAGGATGTTCCTGAAGGGGATTGGATCTGTGGGATCTGTGAGGGTCGTAAGATGGGTAAAAAAGTTGATTTTCCAAAGCCTCCTGAGGGTAAGAAGCTAGCTAGGACAATGCGTCAGAAGCTTCATTCAAGTGATTTGTGGGCTGCTCGTATTGAGAGTATATGGAAAGACGTGGACGGCAGCTATTGGTGTCGGGTACGGTGGTATATGATCCCGGAGGAGACTTCTGTTGGACGACAGCCGCATAACTTGAGCAGGGAGCTATATCGGACCAATGATTCTTCAAACATTGAGATGGAATCTGTCCTTAGACATTGCTATGTCATGACCCCTAAGGAGTATGCCAAAGCTAGCAATGAGGGAGATGATGTTTTCTTGTGTGAATATGAATATGACATCCATTGGCACAGTTTCAAACGCCTGGCTGATATTGATGATGAAAGAGAGAATTCTGATGAGAGTGACAATGATGAAGACTGGAACATCAGCAAGGAATCAGACTCTGATACAGATGAAGATGTTGAATATGAAGAGGAAAATCTTAAAATTGCACAAGCTCAACTACCGACAAGCCATCAACTAGCTGCAAATCTGCACAAGGGACGTTTCTTTGGACTTCAGAAGATAGGAACAAAACGAATTCCAGAGCATATAAGGTCTCACAAACAGACTAATCTTGAAAGAGCAAAGGCTTCACTGTTGTTAGCTTCGCTGCCTAAATCGTTACCTTGTAGAAATAAAGAAATGGATGAGATAACTACATTCATCAAGGGTGCTATTTCTGACAATCAATGTCTGGGACGTTGCCTTTACATTCATGGTGTTCCAGGAACTGGCAAGACCATGAGTGTGCTCTCAGTGATGAGGAGTTTGAGGTCAGAAGTTGATGCAGGAAACATCAAACCATACTGTTTTGTGGAGATTAATGGTCTGAAATTGGCTTCACCAGAGAATATTTATAAGGTCATATATGAGGCATTAAATGGACACAGGGTCGGATGGAAAGAGGCTCTCCGTTTGCTAAATGAGAGGTTTGTTGAAGGGAAGAAAATTGAAGAAGAGGCTGACCGACCATGTATTTTGCTCATTGATGAACTTGATCTTCTTGTAACAAGAAATCAGTCGGTTCTGTACAATATCCTCGACTGGCCTACCAAGCCACATTCCAAGCTAATTGTGATAGGGATAGCAAATACAATGGATCTTCCAGAGAAGTTACTTCCTCGTATATCAAGCCGAATGGGCATCCAAAGGCTTTGCTTTGCCCCATATAATTATCAGCAGCTTCAAGAAATCATTTCGAGTCGCCTCAATGGAATTGATATTTTTGAAAAACAAGCTATGGAATTTGCTTCAAGAAAGTTTACTATCTCGGGAGATGCACGCCGTGCTTTGGAAATATGCAGACGTGCAGCTGAAATTGCAGATTATCGTATAAAGAATCTCGCTTCAAATCCTGATAATGTTGCTGCAGGAAAGGGGCTTGTTAGCATTGCAGACGTTGAAGCAGCCATTCAAGAAATGTTCCAAGCACCTCATATTCAAGTGATGAAAAACTGTTCCAGACTTAGCAAAATTTTCCTGACAGCTATGGTGCACGAGCTTTACAAAACAGGAATGGGGGAAACCACTTTTGAAAAGTTGGCAATGACGGTTTCATGTCTCTGTACCAGTAATGGAGAAGTATTTCCTGGATATGATATCCTCCTGCAAGTTGGCTGTAAGCTGGGGGAATGCAGGGTCATTTTGTGTGAAGCAGGTGCCAGGCACAGGTTGCAAAAGTTGCAGCTCAATTTCCCAAGAAACAAGACTAAGCCAAAAACTAGAAGTGAATCATAA 2673 0.419 MASTPKKSLQSPSKSKLRSQFSPVAAPVTPNSLPARRSTRLNSLLTDSPQTPNLVDAFNESQNQDETPKRGRRIGQYTEPAAKSRLNFDFSRKDKVVTRNNASKLENGKDTAQFLNKRDKKSESDVVPFALQSPDKPKSAKRKKEKEDEKTVELSKKRNGKDKSVKVLFAPTSPEQSETKKRKRKNVFEKKVVTKGKAAASKGGKIAKVQYYKKVVYDGGEFEVGDDVYVKRIEDATSDEEDPEVEECKLCFCFGNEIMIECDSCLGGFHLKCLKPPLKDVPEGDWICGICEGRKMGKKVDFPKPPEGKKLARTMRQKLHSSDLWAARIESIWKDVDGSYWCRVRWYMIPEETSVGRQPHNLSRELYRTNDSSNIEMESVLRHCYVMTPKEYAKASNEGDDVFLCEYEYDIHWHSFKRLADIDDERENSDESDNDEDWNISKESDSDTDEDVEYEEENLKIAQAQLPTSHQLAANLHKGRFFGLQKIGTKRIPEHIRSHKQTNLERAKASLLLASLPKSLPCRNKEMDEITTFIKGAISDNQCLGRCLYIHGVPGTGKTMSVLSVMRSLRSEVDAGNIKPYCFVEINGLKLASPENIYKVIYEALNGHRVGWKEALRLLNERFVEGKKIEEEADRPCILLIDELDLLVTRNQSVLYNILDWPTKPHSKLIVIGIANTMDLPEKLLPRISSRMGIQRLCFAPYNYQQLQEIISSRLNGIDIFEKQAMEFASRKFTISGDARRALEICRRAAEIADYRIKNLASNPDNVAAGKGLVSIADVEAAIQEMFQAPHIQVMKNCSRLSKIFLTAMVHELYKTGMGETTFEKLAMTVSCLCTSNGEVFPGYDILLQVGCKLGECRVILCEAGARHRLQKLQLNFPRNKTKPKTRSES* 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0555 890 MobiDBLite consensus disorder prediction 136 164 - -
Psa7g0555 890 MobiDBLite consensus disorder prediction 1 62 - -
Psa7g0555 890 SMART BAH_4 279 420 IPR001025 GO:0003682
Psa7g0555 890 ProSiteProfiles BAH domain profile. 303 420 IPR001025 GO:0003682
Psa7g0555 890 Gene3D - 505 697 IPR027417 -
Psa7g0555 890 MobiDBLite consensus disorder prediction 425 455 - -
Psa7g0555 890 MobiDBLite consensus disorder prediction 426 455 - -
Psa7g0555 890 MobiDBLite consensus disorder prediction 111 125 - -
Psa7g0555 890 SUPERFAMILY FYVE/PHD zinc finger 235 298 IPR011011 -
Psa7g0555 890 SMART PHD_3 250 292 IPR001965 -
Psa7g0555 890 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 514 757 IPR027417 -
Psa7g0555 890 SMART AAA_5 544 698 IPR003593 -
Psa7g0555 890 MobiDBLite consensus disorder prediction 1 86 - -
Psa7g0555 890 Pfam BAH domain 327 417 IPR001025 GO:0003682
Psa7g0555 890 CDD AAA 525 701 - -
Psa7g0555 890 Pfam AAA lid domain 722 754 IPR041083 -
Psa7g0555 890 MobiDBLite consensus disorder prediction 99 164 - -
Psa7g0555 890 Pfam ATPase family associated with various cellular activities (AAA) 549 694 IPR003959 GO:0005524|GO:0016887
Psa7g0555 890 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 1 177 881 IPR020793 -
Psa7g0555 890 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 227 302 IPR013083 -
Psa7g0555 890 Gene3D - 698 784 - -
Psa7g0555 890 ProSitePatterns Zinc finger PHD-type signature. 248 291 IPR019786 -
Psa7g0555 890 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 177 881 - -
Psa7g0555 890 Gene3D - 314 504 IPR043151 -
Psa7g0555 890 ProSiteProfiles Zinc finger PHD-type profile. 245 294 IPR019787 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0555 211 880 Core DNA Replication Machinery Family AT4G14700 69.572 0.0 969
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0555 K02603 - gmx:100798547 1226.85