Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0525 ATGATAAAGAATTTGGATGATGGAACACGGTATGTTGTAGATGAATTGGATCAAGAGGGTAAACTTAATACCCTGCGTGTTCTGGGTTCGAACCAGTTGATTAGTTTGGAAGAGTTTCATAAAAATATTGGGCCATCGTCATTTGTTCGTAGACATTTGCAGAAAGAGGCGGAAAGTACTAGATTGTTGAGTGTTGCTAAAAAGAAGATGAAGAGTGGTTGGTTGAGCAAACTGGATTCTATTACATGTTTTTATCCTAGCCAAGGATTTGATGAAACTTGCTGCAAAGATTTTGATTCTAGGATACAAAGAGTTCGGGTTAATTTGCATAAGAAACGAGTTAAGGAGCTTTCTTGTCTTTATACTGAACAGGAGTTCAAAGCACACAAAGGCGTTATTTTGACAATGAAGTTCAGTCTCGATGGAAGATATCTAGCTAGCGGTGGTGAAGATGGCATTGTGCGTGTGTGGAAGGTGGTTGAGGATGTAAGAACAAATGAAATGAACATTCTTGACGATGATCCATCCAGTATATATTTCAAAATGAATCAATTTACTGGTATTGTTGCTCCTCTTGACGTAGATAAAGAGAACTTAGTTAAAACAGAGAAGATGAAGAGATCTTCTTCTTCAACCTGTGTGATTATCCCACCTAAGACCTTTCGCATATTGGCAAAACCTATGCACGAATTCCAGGGGCATAGTAATGACATTTTAGACCTTGCATGGTCCAAATCAGGGCTTCTACTCTCATCCTCTCTTGATAAGACAGCGCGCCTATGGCAAGTAGGGATTGACAAATGTCTTCGAGTTTTCTCCCACAATAATTATGTGACATGTGTGAATTTCAATCCTGTCAATGATAATTTTTTCATTAGTGGTTCAATTGATGGAAAGGTGCGTATCTGGGAAGTTGTTCGCTGTCGGGTTGTTGATTATATTGATATCAGAGAGATTGTCACAGCTGTGTGCTTTCGCCCTGATGGAAAGGGCACGATTGTGGGTACCATGGCAGGAAATTGCCGTTTCTATGATATCCTAGATAGTCATATGAAAATGGATGCTAAAATGTCGTTACAAGGCAAAAAGAAGACATCAGGGAAAAGGATTACCGGCTTTCAGTTTTCGCCCAGTGACCCAAGCAAGTTATTGGCTGCTTCGGCGGATTCACATGTATGCATACTCTCAGGAGTTGATGTCATTTACAAATTCAAGGGCCTAAGAAGTGCAGGTCAGATGCATGCTTCCTTCACTTCTGATGGGAAACATATCGTTTCGCTTAGTGAAGGTTCAAATGTTTGTATCTGGAATCACACCGGCCAAGATAGGAACACTTCCAACGCAAAGAAGATTATGTCTTCTGAGAGTTTTCTATCCCACAATGCAACAATTGCCATACCTTGGTGTGGAATTGAGTCAACGCCATTGTCCCCTTCACTTGAAGAAAACTTGATTCAGAGGTCATCATTGTCTTCTCCTGATTGTTTCTTCATGAGTCGCGGATTTCTTTCCGAGTTAGTCCCAAGGGTTTCTGCAACATGGCCAGAGGAAACACTTCTCGACTCAGGTCAAACCGTCGTTTCTCCTACAATATGTAAATCAGAGTATAAATTTTTGAGAAGTGCTTGCAAGGGAATGTCTAATTCTCACTTATGGGGCCAAGTTATTGTAACAGCAGGATCTGATGGATTCATAAAAGTGTACCAAAACTACGGCTTACCTGTTCGCGTTTGA 1734 0.406 MIKNLDDGTRYVVDELDQEGKLNTLRVLGSNQLISLEEFHKNIGPSSFVRRHLQKEAESTRLLSVAKKKMKSGWLSKLDSITCFYPSQGFDETCCKDFDSRIQRVRVNLHKKRVKELSCLYTEQEFKAHKGVILTMKFSLDGRYLASGGEDGIVRVWKVVEDVRTNEMNILDDDPSSIYFKMNQFTGIVAPLDVDKENLVKTEKMKRSSSSTCVIIPPKTFRILAKPMHEFQGHSNDILDLAWSKSGLLLSSSLDKTARLWQVGIDKCLRVFSHNNYVTCVNFNPVNDNFFISGSIDGKVRIWEVVRCRVVDYIDIREIVTAVCFRPDGKGTIVGTMAGNCRFYDILDSHMKMDAKMSLQGKKKTSGKRITGFQFSPSDPSKLLAASADSHVCILSGVDVIYKFKGLRSAGQMHASFTSDGKHIVSLSEGSNVCIWNHTGQDRNTSNAKKIMSSESFLSHNATIAIPWCGIESTPLSPSLEENLIQRSSLSSPDCFFMSRGFLSELVPRVSATWPEETLLDSGQTVVSPTICKSEYKFLRSACKGMSNSHLWGQVIVTAGSDGFIKVYQNYGLPVRV* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0525 577 Gene3D - 310 570 IPR015943 GO:0005515
Psa7g0525 577 Gene3D - 182 307 IPR015943 GO:0005515
Psa7g0525 577 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 2 577 - -
Psa7g0525 577 ProSiteProfiles Trp-Asp (WD) repeats profile. 126 159 IPR001680 GO:0005515
Psa7g0525 577 PRINTS G protein beta WD-40 repeat signature 145 159 IPR020472 -
Psa7g0525 577 PRINTS G protein beta WD-40 repeat signature 249 263 IPR020472 -
Psa7g0525 577 PRINTS G protein beta WD-40 repeat signature 291 305 IPR020472 -
Psa7g0525 577 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 126 159 - -
Psa7g0525 577 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 231 263 - -
Psa7g0525 577 Gene3D - 31 180 IPR015943 GO:0005515
Psa7g0525 577 SMART WD40_4 224 262 IPR001680 GO:0005515
Psa7g0525 577 SMART WD40_4 397 437 IPR001680 GO:0005515
Psa7g0525 577 SMART WD40_4 352 396 IPR001680 GO:0005515
Psa7g0525 577 SMART WD40_4 307 345 IPR001680 GO:0005515
Psa7g0525 577 SMART WD40_4 119 158 IPR001680 GO:0005515
Psa7g0525 577 SMART WD40_4 529 569 IPR001680 GO:0005515
Psa7g0525 577 SMART WD40_4 265 304 IPR001680 GO:0005515
Psa7g0525 577 SUPERFAMILY WD40 repeat-like 122 568 IPR036322 GO:0005515
Psa7g0525 577 ProSiteProfiles Trp-Asp (WD) repeats profile. 271 305 IPR001680 GO:0005515
Psa7g0525 577 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 271 305 - -
Psa7g0525 577 Pfam WD domain, G-beta repeat 124 158 IPR001680 GO:0005515
Psa7g0525 577 Pfam WD domain, G-beta repeat 267 303 IPR001680 GO:0005515
Psa7g0525 577 Pfam WD domain, G-beta repeat 226 261 IPR001680 GO:0005515
Psa7g0525 577 ProSiteProfiles Trp-Asp (WD) repeats profile. 231 271 IPR001680 GO:0005515
Psa7g0525 577 PANTHER WD REPEAT DOMAIN 44 2 577 IPR040324 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0525 Psa-Chr7 35680348 35683697 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0525 203 447 Miscellaneous Gene Families AT5G08390 25.830 3.25e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0525 - - gmx:100788374 961.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g0525 7 35680348 35683697 Psa7g0525 7 35680348 35683697 ECH
Psa7g0525 7 35680348 35683697 Psa5g1763 5 137074592 137077382 ECH
Psa7g0525 7 35680348 35683697 Psa6g0825 6 28994406 28999781 ECH