Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0504 ATGTTGGAAGGTGGTGCTAAGTTCCCGATAGATCTCAACAAAAATAATAACTTTTATGATTTTTCTCAAGGCTTTTACCACAAGCTTGGTGAGGGTACAAATATGTCGATTGACAGTGTTGGGAGTTTGCAGACAAGCAATGGAGGAGGGTCGGTTGCAATGTCGGTTGATAACAGCAGTGTTGGGTCGAATGATTCCAATACCCGCATGTTGGATCATCAAGGGTTGAAGAGGCGTGCCAATGATAACTACTCTGTTGCTCACAGTGCGAATCGCCGGGGAAGAGTCACTCATGCGTTGAGCGACGATGCTTTAGCTCAAGCTCTGATGGACAATAGTTCTCCGACTGAGGGGCTTGAGAATTTTGAAGAGTGGACAATTGATTTGAGGAAGCTTAATATGGGCGAGGCTTTTGCTCAAGGTGCTTTCGGGAAACTCTACCGAGGTACTTACATTGGGGAGGATGTCGCTATCAAGATTTTGGAGAGGCCTGAAAATGATACGTCGAAGGCTCTGTTGATGGAACAACAATTTCAGCAGGAGGTCATGATGCTTGCTACACTGAAGCATCCCAACATTGTTCGCTTCATCGGTGCATGCCGTAAGCCTATGGTTTGGTGCATCGTTACTGAGTATGCCAAGGGTGGATCACTTCGACAGTTCTTAACAAAGCGCCAAAACCGATCTGTTCCCCTCAAACTGGCTATCAAACAAGCTTTGGATGTTGCAAGAGGCATGTCATATGTTCATGGTCTGGGATTGATCCACAGGGACTTGAAGTCCGACAACCTGTTGATTTTTGGTGACAAATCAATCAAAATTGCTGACTTTGGAGTCGCCCGGATTGAGGTGCAAACTGAAGGAATGACTCCCGAGACTGGGACCTATCGTTGGATGGCTCCGGAAATGATCCAGCATAGGCCATACACACAGAAGGTGGATGTATATAGCTTCGGGATTGTCCTGTGGGAGCTCATAACAGGCATGCTTCCATTTCAGAACATGACAGCAGTACAGGCAGCATTTGCGGTTGTCAACAGGAATGTTCGCCCACTCCTGCCCCATGACTGTTTGCCTGTTCTCCGGGAGATCATGACAAGGTGCTGGGATCCAAACCCTGACGTCAGGCCACCCTTTCCTGAGATTGTAGCAATGCTTGAAAATGCAGAGATCGAGGTCATGACAACCGTTCGGAAGGCGAGGTTCAGGTGTTGCATAACCCAGCCAATGACCGCGGAGTGA 1242 0.4783 MLEGGAKFPIDLNKNNNFYDFSQGFYHKLGEGTNMSIDSVGSLQTSNGGGSVAMSVDNSSVGSNDSNTRMLDHQGLKRRANDNYSVAHSANRRGRVTHALSDDALAQALMDNSSPTEGLENFEEWTIDLRKLNMGEAFAQGAFGKLYRGTYIGEDVAIKILERPENDTSKALLMEQQFQQEVMMLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSLRQFLTKRQNRSVPLKLAIKQALDVARGMSYVHGLGLIHRDLKSDNLLIFGDKSIKIADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELITGMLPFQNMTAVQAAFAVVNRNVRPLLPHDCLPVLREIMTRCWDPNPDVRPPFPEIVAMLENAEIEVMTTVRKARFRCCITQPMTAE* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0504 413 ProSitePatterns Serine/Threonine protein kinases active-site signature. 254 266 IPR008271 GO:0004672|GO:0006468
Psa7g0504 413 SMART serkin_6 132 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g0504 413 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 5 404 - -
Psa7g0504 413 ProSiteProfiles Protein kinase domain profile. 132 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g0504 413 CDD STKc_MAP3K-like 139 386 - -
Psa7g0504 413 PANTHER SERINE-THREONINE PROTEIN KINASE 5 404 - -
Psa7g0504 413 Gene3D Transferase(Phosphotransferase) domain 1 215 408 - -
Psa7g0504 413 PRINTS Tyrosine kinase catalytic domain signature 210 223 IPR001245 GO:0004672|GO:0006468
Psa7g0504 413 PRINTS Tyrosine kinase catalytic domain signature 248 266 IPR001245 GO:0004672|GO:0006468
Psa7g0504 413 PRINTS Tyrosine kinase catalytic domain signature 294 304 IPR001245 GO:0004672|GO:0006468
Psa7g0504 413 PRINTS Tyrosine kinase catalytic domain signature 313 335 IPR001245 GO:0004672|GO:0006468
Psa7g0504 413 PRINTS Tyrosine kinase catalytic domain signature 357 379 IPR001245 GO:0004672|GO:0006468
Psa7g0504 413 Gene3D Phosphorylase Kinase; domain 1 120 214 - -
Psa7g0504 413 Pfam Protein tyrosine and serine/threonine kinase 133 386 IPR001245 GO:0004672|GO:0006468
Psa7g0504 413 SUPERFAMILY Protein kinase-like (PK-like) 115 386 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0504 Psa-Chr7 34232703 34236115 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0504 21 413 MAP Kinase Kinase Kinase AT2G24360 78.372 0.0 623
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Psa7g0504 PK_Tyr_Ser-Thr 3.2e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0504 - - gmx:100788536 775.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g0504 7 34232703 34236115 Psa7g0504 7 34232703 34236115 ECH
Psa7g0504 7 34232703 34236115 Psa1g1214 1 82339683 82343490 PCT