Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0495 ATGACAACGCAGGAAGAAGCTGATTCATCCACCCTCGCCGCATCTCCAGAAGTTGCAGGAGGAGAGAACAACGGTATAAACACTGAGCTATGGCAAGCTTGTGCTGGACCTCTTGTCAATCTCCCTTTACCTGGAACTCATGTCGTTTACTTCCCTCAAGGTCACAGCGAACAAGTTGCAGCATCTTTGAAGAAAGATGTGGATGTTCAAGTACCAAACTATTCCAATCTTCCATCGAAACTACCGTGTGTTCTTCATAGTCTCACATTACATGCAGATCCTGATACAGATGAAGTATACGCCCGGATGACGCTTCAGCCAGTGTCTTCGTTTGACATGGATGCCTTATTAAGATCAGATAATTCTCTCAAGTCGAGCAAGACGCAGCCAGAGTTTTTCTGTAAACAACTGACAGCGAGTGATACAAGTACTCATGGAGGTTTCTCTGTACCTCGCCGTGCTGCAGAGAAGATTTTTCCCCCTCTCGATTTCTCTGCGCAACCTCCTGCTCAAGAACTCGTGGCAAAGGATTTGCATGGTAATGTCTGGAAATTCCGCCATATATACCGTGGACAACCGAAACGTCACTTGCTTACAACTGGATGGAGTCTATTTATCAGCGGAAAAAGGCTTTTAGCTGGAGACTCAGTTTTATTTATACGAGATGAAAAGCAGCAGTTGCTTTTGGGTATCAGACGAGCAAACAGGCAACCGACCAATTTGTCATCCTCAGTACTATCAAGTGATAGTATGCACATTGGAATTCTGGCTGCAGCAGCTCATGCTAGTGCAAACAATAGTCCGTTCACCGTGTTTTATAACCCTAGGGCGAGTCCCTCAGAGTTTGTTATTCCATTGGCCAAATACTACAGGGCAGTATACAGCCACCAAGTATCACCTGGCATGCGCTTTCGAATGATATTTGAAACAGAAGACTCGGCAACAAGAAGATATATGGGTACAGTTATAGGCGTCAGTGATCTGGATTCCGTGAGATGGAAAAACTCGCAGTGGCGTAATTTACAGGTTGGTTGGGATGAATCTGGTGCTGGGGAAAGACGGAGTAGGGTCTCAATCTGGGAAATTGAACCTGTTACTGCTCCATTTTTCCTTTGTCCGCCTCCATTCTTCCGATCCAAGAGACCAAGACAACCTGGAATGCCTGATGATGAGCTATTTGATTTCAGTAACCTTTTCAAGAGTACAATGCCTTGGCTTGGTGATGAAATGAGTATGAAGGATCCACAGGCTTTCCCTGGCATGAGCTTAGCTCAATGGATGACCATACAGAAAAATCCTGCTCTGACGAGCTCGTTGCAATCGAATTATGTACCTTCTTTGTCTGGATCCGTTCTACACAATCTTCCCGGCACTGATATTGCTCATCAATTGGGACTTTCTACTCAACAAATCTCTCAGTCAAACAATGTAGCTCTCAATGCTCCAGTTCAGACTCCACCATCCGCATCTAGTGGATTGGGAACAGTCACGCAGCCTGAGCAGCAGTTGAGTAATATTACTCAACATTCTAGACAGAACTTGGCAAATCAAACTCTACCACAGAGTCAAGTTCAGACTCAACTTCTTAATCCTCGGACCCAAATGAACAATATTCTTCAATCACAACAACCATCCGTTCAAAACCATGAACTCCATAGAAGTTTCTCTCAGAACCAACTGCAGCAGCTTCAACAGATGTGTCAGAACCAACAGCCAAATATAATTCAATCCACTATGCCAGATCACAATAACCAACAGTTGCATATGTCTGATAATCAAGTTCGACTTCAGTTGTTACAGAAGCTTCAACAGCAACAACAAACATTCTTGACTCAGCAATCTGCATTGCAGCAGCCTGCTCAATTTGTTCAAAACCAAGACCAGCAGAGACGACTTTTAGACGATCTAACACAGACACGCAACTCTAAGGCCCTAACTCCCGGTCAATTGTTTGAAATTCCTCCTTTGCTTCAAAACTCACTGCCCGAGGCTAATTCTATGATCCATCAGATTACAGATCATAGTAGCCAGAACAATGTTCAGTTCTCTCATCCATCCAAACAACCAAAGCTTCAACATCAACAACAGCAAACGCAACCCGGTTTTCTGTCTAAAACTTCGAGTCATGTTGGACTTCCTTCTGCTACTACAAATAATCAGTTATCTGCTTCTGGTTGTAGTATACGCACTGTAGCAACGGGAACTGCGCCATCTATCATTACTGATGATGTTCCATCTTGCTCCACTTCACCTTCCACAAATAACTGCGCCCGTGCACTTCCTCCAGCGACAGCATCCCATACCCTTATGAGCACAATAGGGAATGACATGGCTCAGTCTGCTGTGACAATCTTGAGTCAAAATTCTAATGCGAATGTGGTAAAATATGTACAGCCAAATTATCAAGTTAAGCCTGGTTTAAACATTTCCGAAAATCACAGCCAAGGAAATTTTTACCCTCAGACGTGCTTGAATGGTGGTGCTGTCCAGACAGATTGTTTGGATACGTCGTCTTCTACGACTTCAGTTTGCCTTTCTCAGAGCAATACACGCTTTCATCAAAACGAAAACCCGTTATCTTACAATCCACCGTCGATGTTCTGTAGAGACAACATTCGAAATGTGGAAATTCAGGCTGATGCTAGGTGCAATGTTTCATATGGCAACAGCATGAACGGGCAAATGAGAATGCCACTGAATCTAGATTCTAATGTAACCAAAGGCACAACAAGGTTAGGCAAGGATTTGTCAACTGATTTCTCTTCCGCAGGCTTGCTTGGAGATTATGAAAATAACAGCGATGCTCAGCCAGAACTTTCATCTTCCATGGTTTCACAAACATTTGGAGTCCCTGATATGACCTTCAACTCAATCGATTCCACCATAAATGATAGTAGTTTCTTGAATACCGGTCCATGGGCTCCACCGCCGCCGCCACATCAGTTTCAACGAATTAGAACATATACCAAGGTATATAAACGCGGAGCTGTGGGAAGGTCCATAGACATAACAAGATATTCAGGTTACGAGGAGCTTAAACATGATCTCGCTCGTAGGTTTGGTATCGAGGGACAGCTGGAAGATCGACAACGGATAGGGTGGAAACTCGTTTATGTAGATCATGAAAATGATGTTCTGCTAGTGGGAGATGACCCTTGGGAGGAGTTTGTCAGTTGCGTCCGCTGTATTAAAATACTTTCTCCTCAAGAAGTTCAACTAATGAGCATAGACGGAGATTTTGGCAATGGCGGTAGCCTTCCGAAACAGGCCGGTAGCAGCTCTGACGGCGGGAATGCTTAA 3300 0.4415 MTTQEEADSSTLAASPEVAGGENNGINTELWQACAGPLVNLPLPGTHVVYFPQGHSEQVAASLKKDVDVQVPNYSNLPSKLPCVLHSLTLHADPDTDEVYARMTLQPVSSFDMDALLRSDNSLKSSKTQPEFFCKQLTASDTSTHGGFSVPRRAAEKIFPPLDFSAQPPAQELVAKDLHGNVWKFRHIYRGQPKRHLLTTGWSLFISGKRLLAGDSVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHASANNSPFTVFYNPRASPSEFVIPLAKYYRAVYSHQVSPGMRFRMIFETEDSATRRYMGTVIGVSDLDSVRWKNSQWRNLQVGWDESGAGERRSRVSIWEIEPVTAPFFLCPPPFFRSKRPRQPGMPDDELFDFSNLFKSTMPWLGDEMSMKDPQAFPGMSLAQWMTIQKNPALTSSLQSNYVPSLSGSVLHNLPGTDIAHQLGLSTQQISQSNNVALNAPVQTPPSASSGLGTVTQPEQQLSNITQHSRQNLANQTLPQSQVQTQLLNPRTQMNNILQSQQPSVQNHELHRSFSQNQLQQLQQMCQNQQPNIIQSTMPDHNNQQLHMSDNQVRLQLLQKLQQQQQTFLTQQSALQQPAQFVQNQDQQRRLLDDLTQTRNSKALTPGQLFEIPPLLQNSLPEANSMIHQITDHSSQNNVQFSHPSKQPKLQHQQQQTQPGFLSKTSSHVGLPSATTNNQLSASGCSIRTVATGTAPSIITDDVPSCSTSPSTNNCARALPPATASHTLMSTIGNDMAQSAVTILSQNSNANVVKYVQPNYQVKPGLNISENHSQGNFYPQTCLNGGAVQTDCLDTSSSTTSVCLSQSNTRFHQNENPLSYNPPSMFCRDNIRNVEIQADARCNVSYGNSMNGQMRMPLNLDSNVTKGTTRLGKDLSTDFSSAGLLGDYENNSDAQPELSSSMVSQTFGVPDMTFNSIDSTINDSSFLNTGPWAPPPPPHQFQRIRTYTKVYKRGAVGRSIDITRYSGYEELKHDLARRFGIEGQLEDRQRIGWKLVYVDHENDVLLVGDDPWEEFVSCVRCIKILSPQEVQLMSIDGDFGNGGSLPKQAGSSSDGGNA* 1100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0495 1099 MobiDBLite consensus disorder prediction 675 703 - -
Psa7g0495 1099 SUPERFAMILY DNA-binding pseudobarrel domain 124 262 IPR015300 -
Psa7g0495 1099 MobiDBLite consensus disorder prediction 1 20 - -
Psa7g0495 1099 Pfam AUX/IAA family 987 1070 IPR033389 -
Psa7g0495 1099 Gene3D - 981 1075 - -
Psa7g0495 1099 PANTHER AUXIN RESPONSE FACTOR 19 1092 - -
Psa7g0495 1099 Pfam B3 DNA binding domain 133 234 IPR003340 GO:0003677
Psa7g0495 1099 Gene3D - 131 234 IPR015300 -
Psa7g0495 1099 SMART B3_2 133 235 IPR003340 GO:0003677
Psa7g0495 1099 Pfam Auxin response factor 259 342 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Psa7g0495 1099 CDD B3_DNA 132 224 IPR003340 GO:0003677
Psa7g0495 1099 ProSiteProfiles PB1 domain profile. 986 1070 IPR000270 GO:0005515
Psa7g0495 1099 SUPERFAMILY CAD & PB1 domains 999 1064 - -
Psa7g0495 1099 ProSiteProfiles B3 DNA-binding domain profile. 133 235 IPR003340 GO:0003677
Psa7g0495 1099 Gene3D - 297 368 - -
Psa7g0495 1099 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 19 1092 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0495 Psa-Chr7 33614167 33620010 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0495 16 475 B3 DNA Binding Superfamily AT1G19220 69.114 0.0 632
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Psa7g0495 B3 9.4e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0495 - - ccaj:109803454 1482.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g0495 7 33614167 33620010 Psa7g0495 7 33614167 33620010 ECH