Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0490 ATGGCTATTTCATCATCATCATCATCATCACTATCGCTATCTCTTCCATTTCAATTCCGTTTTTCTCTCAAAACCCAAACTCGCCGCAATTTCCCTTGCGTCGCGGCGGCGACGTCGAGCACCGAGGTTCCTCTCCTTCAAGTCAATGATCTAAGAGCAAAAATCGTAGAATCCAATCTCGAAATTCTCAAAGGCGTTAATCTCACTGTCAACAGAGGTGAGGTTCACGCTATCATGGGGAAAAACGGTTCTGGAAAAAGCACTTTCGCTAAGGTTCTTGTTGGTCATCCAGATTATGAAGTCACTGGTGGGAGTGTTGTGTTCAAAGGGGGGAATTTGCTTGAAATGGAACCGGAGGAAAGAGCGCTTGAAGGTCTTTTCATGAGCTTTCAATCTCCGGTTGCGATTCCGGGGGTTTCGAATGATCAATTTCTTGTTATGGCTTATAATGCCAGGAGGAAAAAACTTGGTCTCCCTGAACTTGGACCCCTTGAGTGTTTTTCTTATCTGATGGAGAAACTACAACTTGTGAACATGAAGCCTGACTTTCTCAATAGGAATGTCAATGAAGGATTTAGTGGAGGTGAACGAAAACGCAATGAAATCTTGCAGCTTGCTGTTTTGGGGGCAGATTTGGCTATTTTGGATGAAATTGATTCGGGATTGGATGTTGATGCGCTCAGGGATGTGGCAAGTGCTGTTAATAAAATTCTTACCCCCGAGAATTCTTTGTTGATGATTACTCACTATCGGCGGATTCTTGATCTTTTGAAACCTTCCCATGTCCATGTTATGGACAATGGTAAAATTGCAAGGACAGGCGACCTATCTATGGTAGACGCAATTGAGGCAGATGGATATGAACCAGTCTCTGCTTTAATATAA 885 0.4328 MAISSSSSSSLSLSLPFQFRFSLKTQTRRNFPCVAAATSSTEVPLLQVNDLRAKIVESNLEILKGVNLTVNRGEVHAIMGKNGSGKSTFAKVLVGHPDYEVTGGSVVFKGGNLLEMEPEERALEGLFMSFQSPVAIPGVSNDQFLVMAYNARRKKLGLPELGPLECFSYLMEKLQLVNMKPDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDVDALRDVASAVNKILTPENSLLMITHYRRILDLLKPSHVHVMDNGKIARTGDLSMVDAIEADGYEPVSALI* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0490 294 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 276 IPR027417 -
Psa7g0490 294 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 46 292 IPR003439 GO:0005524
Psa7g0490 294 Pfam ABC transporter 63 217 IPR003439 GO:0005524
Psa7g0490 294 ProSitePatterns ABC transporters family signature. 192 206 IPR017871 GO:0005524
Psa7g0490 294 CDD ABC_FeS_Assembly 46 287 IPR010230 GO:0005524
Psa7g0490 294 Gene3D - 45 291 IPR027417 -
Psa7g0490 294 SMART AAA_5 72 269 IPR003593 -
Psa7g0490 294 TIGRFAM sufC: FeS assembly ATPase SufC 46 288 IPR010230 GO:0005524
Psa7g0490 294 PANTHER ABC TRANSPORTER I FAMILY MEMBER 6, CHLOROPLASTIC 36 291 IPR010230 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0490 Psa-Chr7 33201532 33204963 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0490 59 286 Calmodulin-binding Proteins AT2G36910 23.554 5.14e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0490 K09013 - gmx:100811883 434.876