Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0489 ATGAGAGGCAAGGGACCAATTGTGCCACCGTGTGGAAAATTACACCGAATAGATAAAGTTGATGCTCCTCCTTCTTCTTCTTCAAGATATGACATGGTGGTTGACGGAGACGGTAAGAAAAAGCGGAAATGTAAATATCTTCCAGAATCGTTAACAACAGGTCACATTGTGAACAGCATGTTGCTGAATGATGGTCCTCTTCTTGGACGGGAATTTGATTCTCTTCCTTCAGGACCCAAAAATTACACCCATGCTTTTCAACAGGACCATGAGTCTGTAAAAAGGAGGAAGGCTTCCAATAGTGCACTTCAAAATCTCCCTAATTGTAATATGAAAGCACCTGTGAAGAAACATGGTATGGGCAAAGGTCTGATGACAGTTTGGAGGGCAACAAATCATGATACCATAGACCTTCCAGTCGGTTTTGATTTTTCTCACCGGGAAACACCAATATCAATCAACAGGTCTCGGAAAGCAGTAACTGTGAATGGAAAGCCAAGAAATAAATTGCCTAATAGGAAACCTACATTCCAGGAGAAGAGGAAACATTTTATGCAAACAAGAGAGGGTGAATCAAACGAATATGTGACTCAAAACCAGCCACCCATAGAAAATTGTGAACTTGCTTTAGACAGCTCAATATCTGAGGAGGGAGTTGATCAAATTTCAACGTTAATTGATGATGAAGAGTTAGAGCGGAGAGAGTTGCAAGAAGGAACCAATCTGCTTGTTTGTTCAAATGAACTTGCTGCCTATGGAATGCTCGGCGGCTCACTTTGTCCAGAACTGGTGAAGAAATTGTTTAAGGTGTTCCATTTCATATATACATATGCTGTAGTTGTTGATGTTTGTCCCTTCACTCTTGATGAGTTTGTTCAGGCATTTCATGATAAGGACTCAATGTTACTTGGAAAGATTCACGTGGCCCTTCTCACACTGCTTCTATCTGACATTGAAGTAGAGCTTTCTAATGGGTTTTGTCCTCATTTAAATAAGTCATGCAACTTTCTTGCGTTGCTTCACTCAGTTGAAAGTCAAGAATATTCTCTCAATGTTTGGAAAAGATCACTAAATCCTCTTACTTGGATTGAAATACTCCGCCAAGTGCTGGTAGCGGCTGGATTCGGTTCCAAGCAAGGTGCCTTACGAAGAGGAGTCCTTGGCAAGGAACTGGATATTCTTGTAAACTATGGCCTATGCCCTGGCACCTTGAAGTGTGAGTTGTTTAAAATCTTGTCAGAACAAGGCAAAAATGGATGCAAAATTTCTGAGCTGACGAAGTCAATGCAGATTGCGGAATTAAACCTTGGCAGCACAACGGAGGAACTCGAGTCTTTAATATATTCCACACTTTCAAGTGATATTACTTTATTTGAAAAAATTTCATCGTCTGCATATCGATTGCGTATGAGCACTGTTACAAAGGACACCGATGATTGTCAGTCAGATGCAGAAGACTCTGGGAGTGTTGATGACGAGCTTAATGAATCTGACACATGTAGCAGCGGAGATGATTTTGAAATCGATACAATAAACCCTAATAAAAGAAATTTTAAGCATGATAACAGTCGTAAAGTTGAACATAATAGGCAGAAAGTTTACACTGAAATTGATGAGAGCCACGCAGGAGAAGTGTGGATGTTAGGACTGATGGATAGTGAGTACTCAGATTTGAAAATTGAAGAAAAATTGAATGCATTGGCAGCGTTGACAGGTCTTCTTTCATCTGGATCCAGCATCAGGGTGAAGGATCCAGTAAATGTTAAAGCTGATTGTAGTTCTAGTGTCCAATTACGTGGTTCTGGAGCAAAAATTAAGAGATCACTAGTAAAGAAGCCCAGTTCATTATTGAACCCAATTGAACAAATACAATGTATTAAAAAGGTGCAAATGTGTTCTCACCCCGCTTCAGTAGATTCCTCATTGTTAGCCTCAAAATTCCATATTCAGGAGGCATCCTTTGAGAAAAGAAAAGATTCAGCTAATTCACACCCCATACAATCAGTGTTTCTGGGATCTGACCGTAGATACAATAGATACTGGCTTTTCTTGGGCCCTTGTAATGCCGGTGATCCTGGACACAGGAGGGTTTATTTTGAGTCCTCTGAAGATGGTCACTGGGAGGTGATCGATACAGAAGAGGCATTGTGTGCCTTGTTGTCAGTTCTGGATGATAGAGGGAAACGTGAGTCTCTTCTTATTGAATCTTTGGAGAGACGACAAGCATCTTTATGTAGATCTATGTGCAGGGTCAAGGTTAACGATATTGGAATGGGGTGTATGTCACATTCTGATCAGTCTGAGCTGGATAGGGTTACAGAAGACAGCTGTTCTCCAGTATCTGATGTAGACAATCTGAATTTGACTGAGACTGCTAGAGACTCTTTGCCGTCACCTGGTGCTGTGGTAATTGAAGCTGGGAAGAAAGCAGAGGAACAACTACAAAAGTGGATTCGTGTTCAAGAATTTGATTCTTGGATTTGGAATTCCTTTTATTTAGATCTCAACGTTGTAAAATACGGCAAAAGGTCTTATCTTGACTCTCTCGCGAGATGTAGGAGATGCCATGACCTATACTGGAGAGATGAGAGACATTGTAAAATATGCCATATGACATTTGAGCTTGATTTTGACCTTGAAGAAAAATACGCAATCCACATAGCAATGTGCAGGGAGAAAGAAAACAGCAGTACATTTCCAAATCATAAAGTCTTGTCATCACAGATTCAATCGTTGAAAGCTGCAATTTATGCAATTGAGTCTGTTATGCCTGAAGACGCACTTGTTGGTGCTTGGAGGAAGTCTGCTCATAATCTATGGATCAAGAGGCTTAGACGCACCTCGACTTTAGTGGAGCTTTTGCAGGTTCTTGCTGATTTTGTTGGTGCCATCAATAAGGGCTGGTTATTTCAGTGCAAATTTCCAGACGGTGTAATTGAAGAAACTGTTACATCTTTTGCATCAATGCCCCATACTTCATCTGCTCTTGCCCTGTGGTTGGTGAAGTTAGATGCCATTATTGATCCTTACCTGGACAGAGTTCAAACTCAGAAGAAACAGGGAATTGCCATCTACTTGAAAATTAAGGATAAATGCCCTGTGATCTTCTGA 3111 0.4076 MRGKGPIVPPCGKLHRIDKVDAPPSSSSRYDMVVDGDGKKKRKCKYLPESLTTGHIVNSMLLNDGPLLGREFDSLPSGPKNYTHAFQQDHESVKRRKASNSALQNLPNCNMKAPVKKHGMGKGLMTVWRATNHDTIDLPVGFDFSHRETPISINRSRKAVTVNGKPRNKLPNRKPTFQEKRKHFMQTREGESNEYVTQNQPPIENCELALDSSISEEGVDQISTLIDDEELERRELQEGTNLLVCSNELAAYGMLGGSLCPELVKKLFKVFHFIYTYAVVVDVCPFTLDEFVQAFHDKDSMLLGKIHVALLTLLLSDIEVELSNGFCPHLNKSCNFLALLHSVESQEYSLNVWKRSLNPLTWIEILRQVLVAAGFGSKQGALRRGVLGKELDILVNYGLCPGTLKCELFKILSEQGKNGCKISELTKSMQIAELNLGSTTEELESLIYSTLSSDITLFEKISSSAYRLRMSTVTKDTDDCQSDAEDSGSVDDELNESDTCSSGDDFEIDTINPNKRNFKHDNSRKVEHNRQKVYTEIDESHAGEVWMLGLMDSEYSDLKIEEKLNALAALTGLLSSGSSIRVKDPVNVKADCSSSVQLRGSGAKIKRSLVKKPSSLLNPIEQIQCIKKVQMCSHPASVDSSLLASKFHIQEASFEKRKDSANSHPIQSVFLGSDRRYNRYWLFLGPCNAGDPGHRRVYFESSEDGHWEVIDTEEALCALLSVLDDRGKRESLLIESLERRQASLCRSMCRVKVNDIGMGCMSHSDQSELDRVTEDSCSPVSDVDNLNLTETARDSLPSPGAVVIEAGKKAEEQLQKWIRVQEFDSWIWNSFYLDLNVVKYGKRSYLDSLARCRRCHDLYWRDERHCKICHMTFELDFDLEEKYAIHIAMCREKENSSTFPNHKVLSSQIQSLKAAIYAIESVMPEDALVGAWRKSAHNLWIKRLRRTSTLVELLQVLADFVGAINKGWLFQCKFPDGVIEETVTSFASMPHTSSALALWLVKLDAIIDPYLDRVQTQKKQGIAIYLKIKDKCPVIF* 1037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0489 1036 SMART testlast3 261 320 IPR018501 -
Psa7g0489 1036 MobiDBLite consensus disorder prediction 483 503 - -
Psa7g0489 1036 ProSiteProfiles DDT domain profile. 261 320 IPR018501 -
Psa7g0489 1036 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 261 1020 IPR044977 GO:0006357
Psa7g0489 1036 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 39 260 IPR044977 GO:0006357
Psa7g0489 1036 MobiDBLite consensus disorder prediction 477 505 - -
Psa7g0489 1036 Pfam DDT domain 262 317 IPR018501 -
Psa7g0489 1036 PANTHER OS07G0619600 PROTEIN 39 260 - -
Psa7g0489 1036 PANTHER OS07G0619600 PROTEIN 261 1020 - -
Psa7g0489 1036 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 667 740 IPR028941 -
Psa7g0489 1036 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 541 581 IPR028942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0489 Psa-Chr7 33187861 33196085 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0489 262 509 Homeobox Transcription Factor Family AT1G28420 31.208 1.14e-31 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Psa7g0489 WSD 1.2e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0489 - - aprc:113853612 1488.4