Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0480 ATGGCAGAACTAATCACTGCTATTGAGAACAGAACCATATTCATCATATTGGTTTTCTTGTCATGTGTTGTTTCATCATCATATGCCGCTTCTGACTCTGAATTGCTCCTCAAGGTAAAGGACAGTCTAGAAAAAGATGCCAATATATTGACATCATGGAACACAACAACATCTCCTTGTCACGGCGATAATTCCAACTGGCGCGGCATTCGTTGCTACCAAGGAAAAGTTTGGGGATTGAAACTCGAGAATATGGGGTTAAAAGGGTCCATTGATGTTGATTCTCTTAGGGAGTTACCATATCTTAGAACTATTAGTTTCATGCATAATCATTTTGATGGTGCTTGGCCTGAGATTAACAAACTCGTTGGTCTTAAATCGGTTTATCTTTCAAATAACAAATTCTCCGGAGATATTCCTCCTGATGCTTTTGTAGGTATGCAGTGGTTGAAGAAAATTTATCTGTCAAACAATCAGTTTACAGGTCCTATTCCACCTTCTATTGTTTTGTTGCCAAAGCTTATGGAATTGAGATTGGATGGAAACAAATTCATTGGTCCTATTCCTCATCTTAAGCAATCCATATTGAAATCATTCAGTGTAGCTAATAATCAGTTGCAGGGTCCAATCCCAATCACACTTGATAAAATCCACGCTTCTTCCTTCGCAGGGAATGAAGGTTTATGTGGAGCACCATTAGCTGCATGTGCTATGAAGAGGCCATCGATCGCAAGTATTTGTATGGTGGTTGTGGTTGTTTGCGTAGCATTGATTGTGATCGGACTCACAGTGTTTTTCATCCTTCGTCGAAGAGGAAACCGAGATCCATCATCGATTCTCGAGAATCCGCCTTCAGGCCACCATGGTGCTAAAATAAGTTATAAAGATACGGGTAATGACAGTATAAGGTCAACAAGATCGTCGGGTTCGAGCCGAAGTAAAAAAGGCGACCAGATGAAGCTGTCGTTCATAAGAGACGACAGAGAGAGATTTGATTTGCAAGAGTTGTTGAGAGCTTCTGCAGAGATTTTGGGAAGTGGTTGTTATAGTTCTTCTTATAAAGCTTCTTTAGTGAATGGACCAAAAATAGTGGTGAAGAGGTTTAAACAAATGAATAATGTAGGGAAGGAAGAGTTTCAAGAGCACATGAGAAGGATTGGAAGATTGAGTTGTCCTAACTTGATTCCTCTTGTTGCTTACTATTATAGAAAAGAAGAGAAGCTTTTGGTTACTGATTTTGTTCAGAATGGAAGTCTAGCCGTTCGTCTACATGGACATCAAGCTCTAGGAGAACCAAGCCTTGATTGGCCAACAAGGTTGAAAATAGTGAAAGGAGTAGCAAGAGGTCTTGAACATCTCTACAAAGACATGCCAAGCCTAATTGCCCCTCATGGAAATCTCAAATCCTCCAACGTCCTTCTAACCGAAACATTCGAACCACTCCTCACAGACTATGGACTAGTCCCAGTCACAAACCAAGAAATGGCCAAAGACATAATGGTAATATACAAATCACCAGAATATCTTCAACATGGAAGAATCACAAAGAAAACTGACGTTTGGTCTCTTGGAATACTAATCCTAGAGATCCTAACTGGTAAATTTCCAGCTACATTCTTACAACAAGGGAAAGGAAGTGAGGTGAGTTTAGCAAATTGGGTGTACTCAGTAGTACCTGAGGAATGGAATAGTTCAGTGTTTGATAAAGAAATGGGTGACACAGTGAATGGTGAGGGTGAGATGGATAAGCTTTTGAGAATAGCATTGACTTGTTGTGAAGAAGATATTGAGAAAAGATGTGATTTGAAAGAAGTTGTTGAGAAAATTCTACAAGTGAATGAGAGAGACGTTGTTGAGAGTATAATAGACATGAATTGA 1878 0.3962 MAELITAIENRTIFIILVFLSCVVSSSYAASDSELLLKVKDSLEKDANILTSWNTTTSPCHGDNSNWRGIRCYQGKVWGLKLENMGLKGSIDVDSLRELPYLRTISFMHNHFDGAWPEINKLVGLKSVYLSNNKFSGDIPPDAFVGMQWLKKIYLSNNQFTGPIPPSIVLLPKLMELRLDGNKFIGPIPHLKQSILKSFSVANNQLQGPIPITLDKIHASSFAGNEGLCGAPLAACAMKRPSIASICMVVVVVCVALIVIGLTVFFILRRRGNRDPSSILENPPSGHHGAKISYKDTGNDSIRSTRSSGSSRSKKGDQMKLSFIRDDRERFDLQELLRASAEILGSGCYSSSYKASLVNGPKIVVKRFKQMNNVGKEEFQEHMRRIGRLSCPNLIPLVAYYYRKEEKLLVTDFVQNGSLAVRLHGHQALGEPSLDWPTRLKIVKGVARGLEHLYKDMPSLIAPHGNLKSSNVLLTETFEPLLTDYGLVPVTNQEMAKDIMVIYKSPEYLQHGRITKKTDVWSLGILILEILTGKFPATFLQQGKGSEVSLANWVYSVVPEEWNSSVFDKEMGDTVNGEGEMDKLLRIALTCCEEDIEKRCDLKEVVEKILQVNERDVVESIIDMN* 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0480 625 MobiDBLite consensus disorder prediction 278 319 - -
Psa7g0480 625 Gene3D Ribonuclease Inhibitor 29 192 IPR032675 -
Psa7g0480 625 Gene3D Phosphorylase Kinase; domain 1 303 413 - -
Psa7g0480 625 MobiDBLite consensus disorder prediction 297 317 - -
Psa7g0480 625 PANTHER LRR RECEPTOR-LIKE KINASE 8 617 - -
Psa7g0480 625 Pfam Leucine rich repeat 124 184 IPR001611 GO:0005515
Psa7g0480 625 ProSiteProfiles Protein kinase domain profile. 338 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g0480 625 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 8 617 - -
Psa7g0480 625 SUPERFAMILY L domain-like 29 232 - -
Psa7g0480 625 Pfam Protein tyrosine and serine/threonine kinase 342 609 IPR001245 GO:0004672|GO:0006468
Psa7g0480 625 Pfam Leucine rich repeat N-terminal domain 30 72 IPR013210 -
Psa7g0480 625 Gene3D Ribonuclease Inhibitor 194 236 IPR032675 -
Psa7g0480 625 SUPERFAMILY Protein kinase-like (PK-like) 342 611 IPR011009 -
Psa7g0480 625 Gene3D Transferase(Phosphotransferase) domain 1 414 622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0480 Psa-Chr7 32468959 32471634 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0480 12 616 Receptor kinase-like Gene Family AT5G35390 52.269 0.0 627
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Psa7g0480 Pkinase 2.2e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0480 - - gmx:100804368 850.892
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g0480 7 32468959 32471634 Psa7g0480 7 32468959 32471634 ECH