Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0476 ATGGGGATTTGCTTCAGCATTGAAGAAAAACACGTTTCCCTCTCCGATTCAAAACCAAAACCTAATTCCACAGGTTCGGTTGGAAATGAATCCGCTGCACCAACGACTCTATTAGGTGGTGGTACTGGTTCCATGAATATCAAAGAACTTCGTGAAGGTGCTGGATACAGCAACGTCCATATTTTTACCTACAACGAATTGAGGCTTTCCACTAAGCAGTTTCGTCCCGATTTCATTCTTGGAGAAGGTGGATTTGGTGTTGTGTATAAAGGTGTCATTGATGATAGTGTTAGAGCCGGTTATAAATCAACTGAAGTCGCTATTAAGGAACTCAATCGCGAAGGGTTTCAAGGCGACAGGGAATGGCTTGCCGAAGTTAACTATTTGGGTCAATTCAGTCACCCGAATCTTGTGAAGCTCTTTGGGTACTGCTGTGAGGATGAACACCGCTTGTTGGTCTATGAGTACATGGCTAGTGGGAGCTTGGAGAAACATCTTTTCCGCAGAGCTGGCTCAACTTGA 522 0.4444 MGICFSIEEKHVSLSDSKPKPNSTGSVGNESAAPTTLLGGGTGSMNIKELREGAGYSNVHIFTYNELRLSTKQFRPDFILGEGGFGVVYKGVIDDSVRAGYKSTEVAIKELNREGFQGDREWLAEVNYLGQFSHPNLVKLFGYCCEDEHRLLVYEYMASGSLEKHLFRRAGST* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0476 173 Gene3D Phosphorylase Kinase; domain 1 48 156 - -
Psa7g0476 173 PANTHER OS01G0588500 PROTEIN-RELATED 42 172 - -
Psa7g0476 173 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL17-RELATED 42 172 - -
Psa7g0476 173 MobiDBLite consensus disorder prediction 17 35 - -
Psa7g0476 173 MobiDBLite consensus disorder prediction 14 35 - -
Psa7g0476 173 ProSitePatterns Protein kinases ATP-binding region signature. 80 109 IPR017441 GO:0005524
Psa7g0476 173 ProSiteProfiles Protein kinase domain profile. 74 173 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g0476 173 SUPERFAMILY Protein kinase-like (PK-like) 56 169 IPR011009 -
Psa7g0476 173 Pfam Protein tyrosine and serine/threonine kinase 80 169 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0476 Psa-Chr7 32431811 32433538 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0476 4 167 Glycoside Hydrolase AT3G07070 37.725 4.77e-28 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Psa7g0476 PK_Tyr_Ser-Thr 4e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0476 - - gmx:100800465 276.559